Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SUMO3P55854 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SUMO3P55854 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SUMO3P55854 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
SUMO3P55854 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
SUMO3P55854 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC12.65□□□□□ -0.38
SUMO3P55854 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SUMO3P55854 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
SUMO3P55854 CR383656.2-201ENST00000548656 2254 ntBASIC12.65□□□□□ -0.38
SUMO3P55854 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SUMO3P55854 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
SUMO3P55854 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SUMO3P55854 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SUMO3P55854 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SUMO3P55854 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SUMO3P55854 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SUMO3P55854 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
SUMO3P55854 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SUMO3P55854 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
SUMO3P55854 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
SUMO3P55854 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SUMO3P55854 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SUMO3P55854 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SUMO3P55854 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC12.65□□□□□ -0.38
SUMO3P55854 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
SUMO3P55854 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SUMO3P55854 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
SUMO3P55854 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SUMO3P55854 PYY2-201ENST00000315776 282 ntBASIC12.65□□□□□ -0.38
SUMO3P55854 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC12.65□□□□□ -0.38
SUMO3P55854 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC12.65□□□□□ -0.38
SUMO3P55854 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SUMO3P55854 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC12.65□□□□□ -0.38
SUMO3P55854 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC12.65□□□□□ -0.38
SUMO3P55854 AL627231.1-201ENST00000394467 1125 ntBASIC12.65□□□□□ -0.38
SUMO3P55854 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC12.65□□□□□ -0.38
SUMO3P55854 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SUMO3P55854 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC12.65□□□□□ -0.38
SUMO3P55854 OR2W2P-201ENST00000406313 909 ntBASIC12.65□□□□□ -0.38
SUMO3P55854 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC12.65□□□□□ -0.38
SUMO3P55854 EEF1DP2-201ENST00000433698 843 ntBASIC12.65□□□□□ -0.38
SUMO3P55854 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC12.65□□□□□ -0.38
SUMO3P55854 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC12.65□□□□□ -0.38
SUMO3P55854 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SUMO3P55854 NDUFS6P1-201ENST00000485187 316 ntBASIC12.65□□□□□ -0.38
SUMO3P55854 IGLV3-15-201ENST00000518356 244 ntBASIC12.65□□□□□ -0.38
SUMO3P55854 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC12.65□□□□□ -0.38
SUMO3P55854 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC12.65□□□□□ -0.38
SUMO3P55854 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC12.65□□□□□ -0.38
SUMO3P55854 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC12.65□□□□□ -0.38
SUMO3P55854 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC12.65□□□□□ -0.38
SUMO3P55854 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC12.65□□□□□ -0.38
SUMO3P55854 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC12.65□□□□□ -0.38
SUMO3P55854 MIR4326-201ENST00000582203 59 ntBASIC12.65□□□□□ -0.38
SUMO3P55854 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC12.65□□□□□ -0.38
SUMO3P55854 CMC2-224ENST00000630396 481 ntTSL 5 BASIC12.65□□□□□ -0.38
SUMO3P55854 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC12.65□□□□□ -0.38
SUMO3P55854 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC12.65□□□□□ -0.38
SUMO3P55854 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC12.65□□□□□ -0.38
SUMO3P55854 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SUMO3P55854 ZNF493-208ENST00000599461 1769 ntBASIC12.65□□□□□ -0.38
SUMO3P55854 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
SUMO3P55854 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SUMO3P55854 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SUMO3P55854 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.65□□□□□ -0.38
SUMO3P55854 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.65□□□□□ -0.38
SUMO3P55854 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SUMO3P55854 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SUMO3P55854 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC12.65□□□□□ -0.38
SUMO3P55854 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SUMO3P55854 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
SUMO3P55854 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
SUMO3P55854 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
SUMO3P55854 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SUMO3P55854 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
SUMO3P55854 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.65□□□□□ -0.38
SUMO3P55854 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SUMO3P55854 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC12.65□□□□□ -0.38
SUMO3P55854 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC12.65□□□□□ -0.38
SUMO3P55854 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.39
SUMO3P55854 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.39
SUMO3P55854 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
SUMO3P55854 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SUMO3P55854 PDXDC2P-206ENST00000534700 1315 ntBASIC12.64□□□□□ -0.39
SUMO3P55854 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SUMO3P55854 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SUMO3P55854 AC245140.2-201ENST00000624054 1939 ntBASIC12.64□□□□□ -0.39
SUMO3P55854 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
SUMO3P55854 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.64□□□□□ -0.39
SUMO3P55854 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC12.64□□□□□ -0.39
SUMO3P55854 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SUMO3P55854 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
SUMO3P55854 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC12.64□□□□□ -0.39
SUMO3P55854 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC12.64□□□□□ -0.39
SUMO3P55854 GOLGA8UP-201ENST00000527159 1755 ntBASIC12.64□□□□□ -0.39
SUMO3P55854 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SUMO3P55854 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
SUMO3P55854 STK3-218ENST00000617590 2485 ntTSL 5 BASIC12.64□□□□□ -0.39
SUMO3P55854 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SUMO3P55854 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms