Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
BRPF1P55201 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC17.78■□□□□ 0.44
BRPF1P55201 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BRPF1P55201 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BRPF1P55201 RCC2P5-201ENST00000492126 1487 ntBASIC17.78■□□□□ 0.44
BRPF1P55201 SAT1-201ENST00000379251 801 ntTSL 2 BASIC17.78■□□□□ 0.44
BRPF1P55201 SAT1-202ENST00000379253 909 ntTSL 2 BASIC17.78■□□□□ 0.44
BRPF1P55201 SAT1-203ENST00000379254 868 ntTSL 3 BASIC17.78■□□□□ 0.44
BRPF1P55201 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BRPF1P55201 GGTLC4P-201ENST00000402176 664 ntBASIC17.78■□□□□ 0.44
BRPF1P55201 PIN4P1-201ENST00000451079 396 ntBASIC17.78■□□□□ 0.44
BRPF1P55201 AC130709.1-201ENST00000484779 1212 ntBASIC17.78■□□□□ 0.44
BRPF1P55201 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC17.78■□□□□ 0.44
BRPF1P55201 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC17.78■□□□□ 0.44
BRPF1P55201 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC17.78■□□□□ 0.44
BRPF1P55201 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
BRPF1P55201 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BRPF1P55201 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
BRPF1P55201 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC17.78■□□□□ 0.44
BRPF1P55201 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BRPF1P55201 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BRPF1P55201 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
BRPF1P55201 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
BRPF1P55201 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BRPF1P55201 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
BRPF1P55201 MSNP1-201ENST00000511640 1732 ntBASIC17.78■□□□□ 0.44
BRPF1P55201 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
BRPF1P55201 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BRPF1P55201 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
BRPF1P55201 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
BRPF1P55201 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC17.77■□□□□ 0.44
BRPF1P55201 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
BRPF1P55201 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
BRPF1P55201 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC17.77■□□□□ 0.44
BRPF1P55201 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
BRPF1P55201 AC073869.1-201ENST00000415574 2762 ntBASIC17.77■□□□□ 0.44
BRPF1P55201 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC17.77■□□□□ 0.44
BRPF1P55201 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC17.77■□□□□ 0.44
BRPF1P55201 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
BRPF1P55201 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
BRPF1P55201 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
BRPF1P55201 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
BRPF1P55201 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
BRPF1P55201 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
BRPF1P55201 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC17.77■□□□□ 0.44
BRPF1P55201 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC17.77■□□□□ 0.44
BRPF1P55201 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC17.77■□□□□ 0.44
BRPF1P55201 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
BRPF1P55201 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
BRPF1P55201 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC17.77■□□□□ 0.44
BRPF1P55201 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
BRPF1P55201 RPL8P2-201ENST00000430538 502 ntBASIC17.77■□□□□ 0.44
BRPF1P55201 AC092573.1-201ENST00000433054 884 ntBASIC17.77■□□□□ 0.44
BRPF1P55201 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
BRPF1P55201 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC17.77■□□□□ 0.44
BRPF1P55201 SCARNA12-201ENST00000459155 270 ntBASIC17.77■□□□□ 0.44
BRPF1P55201 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
BRPF1P55201 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC17.77■□□□□ 0.44
BRPF1P55201 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC17.77■□□□□ 0.44
BRPF1P55201 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC17.77■□□□□ 0.44
BRPF1P55201 RN7SL596P-201ENST00000582123 288 ntBASIC17.77■□□□□ 0.44
BRPF1P55201 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC17.77■□□□□ 0.44
BRPF1P55201 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
BRPF1P55201 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
BRPF1P55201 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
BRPF1P55201 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
BRPF1P55201 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
BRPF1P55201 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
BRPF1P55201 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
BRPF1P55201 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC17.77■□□□□ 0.43
BRPF1P55201 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
BRPF1P55201 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
BRPF1P55201 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
BRPF1P55201 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
BRPF1P55201 AL355102.3-201ENST00000554299 1678 ntBASIC17.77■□□□□ 0.43
BRPF1P55201 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
BRPF1P55201 MANEA-AS1-201ENST00000564541 2268 ntBASIC17.77■□□□□ 0.43
BRPF1P55201 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.43
BRPF1P55201 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.43
BRPF1P55201 OR2I1P-210ENST00000642037 4691 ntBASIC17.77■□□□□ 0.43
BRPF1P55201 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
BRPF1P55201 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
BRPF1P55201 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
BRPF1P55201 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC17.76■□□□□ 0.43
BRPF1P55201 TEKT4P2-202ENST00000559466 1312 ntBASIC17.76■□□□□ 0.43
BRPF1P55201 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC17.76■□□□□ 0.43
BRPF1P55201 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
BRPF1P55201 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BRPF1P55201 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC17.76■□□□□ 0.43
BRPF1P55201 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
BRPF1P55201 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BRPF1P55201 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BRPF1P55201 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BRPF1P55201 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
BRPF1P55201 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC17.76■□□□□ 0.43
BRPF1P55201 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
BRPF1P55201 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
BRPF1P55201 AC136604.1-202ENST00000425471 771 ntBASIC17.76■□□□□ 0.43
BRPF1P55201 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC17.76■□□□□ 0.43
BRPF1P55201 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms