Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
APOC4P55056 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
APOC4P55056 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
APOC4P55056 PRRC2A-202ENST00000376033 6893 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
APOC4P55056 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
APOC4P55056 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
APOC4P55056 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
APOC4P55056 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
APOC4P55056 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
APOC4P55056 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
APOC4P55056 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC10.29□□□□□ -0.76
APOC4P55056 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
APOC4P55056 OR2W2P-201ENST00000406313 909 ntBASIC10.29□□□□□ -0.76
APOC4P55056 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
APOC4P55056 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
APOC4P55056 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC10.29□□□□□ -0.76
APOC4P55056 DPY19L2P5-201ENST00000456300 331 ntBASIC10.29□□□□□ -0.76
APOC4P55056 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC10.29□□□□□ -0.76
APOC4P55056 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
APOC4P55056 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC10.29□□□□□ -0.76
APOC4P55056 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC10.29□□□□□ -0.76
APOC4P55056 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC10.29□□□□□ -0.76
APOC4P55056 KLF17P1-201ENST00000547105 1126 ntBASIC10.29□□□□□ -0.76
APOC4P55056 KRT8P2-201ENST00000556193 944 ntBASIC10.29□□□□□ -0.76
APOC4P55056 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
APOC4P55056 RN7SL455P-201ENST00000580629 282 ntBASIC10.29□□□□□ -0.76
APOC4P55056 DBP-202ENST00000593500 712 ntTSL 2 BASIC10.29□□□□□ -0.76
APOC4P55056 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
APOC4P55056 ST5-261ENST00000626808 1071 ntTSL 5 BASIC10.29□□□□□ -0.76
APOC4P55056 CMC2-224ENST00000630396 481 ntTSL 5 BASIC10.29□□□□□ -0.76
APOC4P55056 AL139424.3-202ENST00000641619 917 ntBASIC10.29□□□□□ -0.76
APOC4P55056 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
APOC4P55056 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
APOC4P55056 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
APOC4P55056 LINC00552-201ENST00000625151 2579 ntBASIC10.29□□□□□ -0.76
APOC4P55056 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC10.29□□□□□ -0.76
APOC4P55056 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
APOC4P55056 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
APOC4P55056 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
APOC4P55056 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
APOC4P55056 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
APOC4P55056 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
APOC4P55056 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC10.29□□□□□ -0.76
APOC4P55056 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
APOC4P55056 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
APOC4P55056 AC012617.1-204ENST00000586340 2305 ntBASIC10.29□□□□□ -0.76
APOC4P55056 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC10.29□□□□□ -0.76
APOC4P55056 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC10.29□□□□□ -0.76
APOC4P55056 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC10.29□□□□□ -0.76
APOC4P55056 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
APOC4P55056 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
APOC4P55056 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
APOC4P55056 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
APOC4P55056 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
APOC4P55056 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
APOC4P55056 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
APOC4P55056 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
APOC4P55056 PHF20-203ENST00000374012 5922 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
APOC4P55056 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
APOC4P55056 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
APOC4P55056 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
APOC4P55056 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
APOC4P55056 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC10.28□□□□□ -0.76
APOC4P55056 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
APOC4P55056 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC10.28□□□□□ -0.76
APOC4P55056 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
APOC4P55056 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC10.28□□□□□ -0.76
APOC4P55056 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
APOC4P55056 USP39-220ENST00000613444 2161 ntTSL 2 BASIC10.28□□□□□ -0.76
APOC4P55056 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC10.28□□□□□ -0.76
APOC4P55056 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC10.28□□□□□ -0.76
APOC4P55056 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC10.28□□□□□ -0.76
APOC4P55056 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
APOC4P55056 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
APOC4P55056 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
APOC4P55056 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
APOC4P55056 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
APOC4P55056 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC10.28□□□□□ -0.76
APOC4P55056 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
APOC4P55056 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
APOC4P55056 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
APOC4P55056 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
APOC4P55056 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC10.28□□□□□ -0.76
APOC4P55056 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC10.28□□□□□ -0.76
APOC4P55056 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC10.28□□□□□ -0.76
APOC4P55056 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC10.28□□□□□ -0.76
APOC4P55056 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
APOC4P55056 RGS5-216ENST00000449680 788 ntTSL 3 BASIC10.28□□□□□ -0.76
APOC4P55056 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
APOC4P55056 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
APOC4P55056 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC10.28□□□□□ -0.76
APOC4P55056 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
APOC4P55056 AC104784.1-201ENST00000473096 294 ntBASIC10.28□□□□□ -0.76
APOC4P55056 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC10.28□□□□□ -0.76
APOC4P55056 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC10.28□□□□□ -0.76
APOC4P55056 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC10.28□□□□□ -0.76
APOC4P55056 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC10.28□□□□□ -0.76
APOC4P55056 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC10.28□□□□□ -0.76
APOC4P55056 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC10.28□□□□□ -0.76
APOC4P55056 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC10.28□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms