Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 ZKSCAN3-203ENST00000377255 4799 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NKX2-5P52952 ZMYND11-201ENST00000309776 4228 ntTSL 2 BASIC11.84□□□□□ -0.51
NKX2-5P52952 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC11.84□□□□□ -0.51
NKX2-5P52952 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NKX2-5P52952 MVK-213ENST00000625889 2591 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NKX2-5P52952 ARSG-201ENST00000448504 4642 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NKX2-5P52952 WFS1-202ENST00000503569 3255 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
NKX2-5P52952 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
NKX2-5P52952 POLR1B-216ENST00000537335 4961 ntTSL 2 BASIC11.84□□□□□ -0.51
NKX2-5P52952 ENOX2-203ENST00000370935 3963 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
NKX2-5P52952 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NKX2-5P52952 RCAN1-214ENST00000620920 2257 ntTSL 4 BASIC11.84□□□□□ -0.51
NKX2-5P52952 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
NKX2-5P52952 LINC01973-201ENST00000374983 4678 ntTSL 2 BASIC11.84□□□□□ -0.51
NKX2-5P52952 MON2-212ENST00000552115 3760 ntTSL 5 BASIC11.84□□□□□ -0.51
NKX2-5P52952 DLGAP4-203ENST00000373907 3337 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
NKX2-5P52952 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
NKX2-5P52952 ZNF213-AS1-204ENST00000572691 3232 ntTSL 5 BASIC11.84□□□□□ -0.51
NKX2-5P52952 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC11.84□□□□□ -0.51
NKX2-5P52952 SPRTN-204ENST00000391858 3559 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NKX2-5P52952 IQCK-202ENST00000320394 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
NKX2-5P52952 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NKX2-5P52952 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
NKX2-5P52952 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NKX2-5P52952 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NKX2-5P52952 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
NKX2-5P52952 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
NKX2-5P52952 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NKX2-5P52952 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC11.84□□□□□ -0.51
NKX2-5P52952 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NKX2-5P52952 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NKX2-5P52952 AL161932.2-201ENST00000435436 679 ntBASIC11.84□□□□□ -0.51
NKX2-5P52952 INE1-201ENST00000456273 945 ntBASIC11.84□□□□□ -0.51
NKX2-5P52952 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC11.84□□□□□ -0.51
NKX2-5P52952 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
NKX2-5P52952 AC131206.1-201ENST00000538078 1211 ntBASIC11.84□□□□□ -0.51
NKX2-5P52952 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC11.84□□□□□ -0.51
NKX2-5P52952 MAX-210ENST00000555419 765 ntTSL 5 BASIC11.84□□□□□ -0.51
NKX2-5P52952 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
NKX2-5P52952 AC021087.4-201ENST00000563761 564 ntBASIC11.84□□□□□ -0.51
NKX2-5P52952 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC11.84□□□□□ -0.51
NKX2-5P52952 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC11.84□□□□□ -0.51
NKX2-5P52952 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC11.84□□□□□ -0.51
NKX2-5P52952 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
NKX2-5P52952 MIR1199-201ENST00000621445 119 ntBASIC11.84□□□□□ -0.51
NKX2-5P52952 AL161645.1-201ENST00000622716 1255 ntBASIC11.84□□□□□ -0.51
NKX2-5P52952 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC11.84□□□□□ -0.51
NKX2-5P52952 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
NKX2-5P52952 AF228730.6-201ENST00000641497 218 ntBASIC11.84□□□□□ -0.51
NKX2-5P52952 AC084121.3-201ENST00000641716 218 ntBASIC11.84□□□□□ -0.51
NKX2-5P52952 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NKX2-5P52952 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
NKX2-5P52952 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
NKX2-5P52952 ZFYVE27-207ENST00000423811 3045 ntAPPRIS P4 TSL 5 BASIC11.84□□□□□ -0.51
NKX2-5P52952 PTPN7-202ENST00000367279 3265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
NKX2-5P52952 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
NKX2-5P52952 ARHGEF2-203ENST00000361247 4149 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
NKX2-5P52952 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NKX2-5P52952 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC11.84□□□□□ -0.51
NKX2-5P52952 CIZ1-225ENST00000538431 2996 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
NKX2-5P52952 CYTH2-213ENST00000620214 2020 ntTSL 5 BASIC11.84□□□□□ -0.51
NKX2-5P52952 ZNF831-203ENST00000637017 10953 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
NKX2-5P52952 DDI1-201ENST00000302259 2609 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
NKX2-5P52952 POM121L9P-201ENST00000414583 5018 ntTSL 2 BASIC11.84□□□□□ -0.51
NKX2-5P52952 AC022098.1-201ENST00000588387 2861 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NKX2-5P52952 ATP2A1-203ENST00000536376 3130 ntTSL 2 BASIC11.84□□□□□ -0.51
NKX2-5P52952 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NKX2-5P52952 RPH3A-202ENST00000415485 4452 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
NKX2-5P52952 RHD-210ENST00000622561 3007 ntTSL 5 BASIC11.84□□□□□ -0.51
NKX2-5P52952 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC11.84□□□□□ -0.51
NKX2-5P52952 LARGE1-202ENST00000397394 4138 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
NKX2-5P52952 GRM4-204ENST00000535756 6670 ntTSL 5 BASIC11.84□□□□□ -0.51
NKX2-5P52952 CYP26B1-202ENST00000412253 4025 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
NKX2-5P52952 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
NKX2-5P52952 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
NKX2-5P52952 AC061965.1-201ENST00000560524 1465 ntBASIC11.83□□□□□ -0.52
NKX2-5P52952 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NKX2-5P52952 ALDH3A2-219ENST00000579855 3583 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
NKX2-5P52952 INHBC-201ENST00000309668 1992 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NKX2-5P52952 PANK2-206ENST00000497424 4815 ntTSL 2 BASIC11.83□□□□□ -0.52
NKX2-5P52952 CCDC144A-204ENST00000360524 5830 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
NKX2-5P52952 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NKX2-5P52952 BCAS3-202ENST00000407086 3496 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
NKX2-5P52952 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NKX2-5P52952 PHACTR3-205ENST00000395636 2372 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NKX2-5P52952 SPATA13-205ENST00000409126 2111 ntTSL 2 BASIC11.83□□□□□ -0.52
NKX2-5P52952 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC11.83□□□□□ -0.52
NKX2-5P52952 FER1L4-208ENST00000611673 3860 ntTSL 2 BASIC11.83□□□□□ -0.52
NKX2-5P52952 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NKX2-5P52952 TTLL13P-206ENST00000641754 2256 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.52
NKX2-5P52952 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC11.83□□□□□ -0.52
NKX2-5P52952 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NKX2-5P52952 AC111182.1-201ENST00000588701 3419 ntBASIC11.83□□□□□ -0.52
NKX2-5P52952 CPSF3-202ENST00000460593 3157 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NKX2-5P52952 AC015818.9-201ENST00000591705 4582 ntBASIC11.83□□□□□ -0.52
NKX2-5P52952 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NKX2-5P52952 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NKX2-5P52952 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NKX2-5P52952 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NKX2-5P52952 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms