Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 TREHP1-201ENST00000531328 465 ntBASIC14.82□□□□□ -0.04
BRCC3P46736 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
BRCC3P46736 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC14.82□□□□□ -0.04
BRCC3P46736 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC14.82□□□□□ -0.04
BRCC3P46736 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC14.82□□□□□ -0.04
BRCC3P46736 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC14.82□□□□□ -0.04
BRCC3P46736 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BRCC3P46736 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
BRCC3P46736 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
BRCC3P46736 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BRCC3P46736 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.82□□□□□ -0.04
BRCC3P46736 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
BRCC3P46736 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BRCC3P46736 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
BRCC3P46736 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.82□□□□□ -0.04
BRCC3P46736 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC14.82□□□□□ -0.04
BRCC3P46736 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BRCC3P46736 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
BRCC3P46736 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BRCC3P46736 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
BRCC3P46736 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
BRCC3P46736 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
BRCC3P46736 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
BRCC3P46736 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
BRCC3P46736 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BRCC3P46736 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.82□□□□□ -0.04
BRCC3P46736 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
BRCC3P46736 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BRCC3P46736 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
BRCC3P46736 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.81□□□□□ -0.04
BRCC3P46736 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
BRCC3P46736 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
BRCC3P46736 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.81□□□□□ -0.04
BRCC3P46736 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
BRCC3P46736 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
BRCC3P46736 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
BRCC3P46736 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
BRCC3P46736 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
BRCC3P46736 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
BRCC3P46736 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.81□□□□□ -0.04
BRCC3P46736 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
BRCC3P46736 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
BRCC3P46736 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
BRCC3P46736 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.81□□□□□ -0.04
BRCC3P46736 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
BRCC3P46736 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
BRCC3P46736 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
BRCC3P46736 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
BRCC3P46736 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
BRCC3P46736 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC14.81□□□□□ -0.04
BRCC3P46736 AQP7P5-201ENST00000428759 1049 ntBASIC14.81□□□□□ -0.04
BRCC3P46736 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC14.81□□□□□ -0.04
BRCC3P46736 AQP7P4-201ENST00000447083 1042 ntBASIC14.81□□□□□ -0.04
BRCC3P46736 AQP7P2-201ENST00000453967 1041 ntBASIC14.81□□□□□ -0.04
BRCC3P46736 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
BRCC3P46736 AC008026.2-201ENST00000495438 348 ntBASIC14.81□□□□□ -0.04
BRCC3P46736 PTK2-225ENST00000520892 571 ntTSL 4 BASIC14.81□□□□□ -0.04
BRCC3P46736 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC14.81□□□□□ -0.04
BRCC3P46736 MT2A-202ENST00000561491 581 ntTSL 2 BASIC14.81□□□□□ -0.04
BRCC3P46736 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC14.81□□□□□ -0.04
BRCC3P46736 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
BRCC3P46736 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC14.81□□□□□ -0.04
BRCC3P46736 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
BRCC3P46736 AQP7P3-201ENST00000624547 1041 ntBASIC14.81□□□□□ -0.04
BRCC3P46736 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC14.81□□□□□ -0.04
BRCC3P46736 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
BRCC3P46736 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
BRCC3P46736 AC026748.1-201ENST00000624349 3251 ntBASIC14.81□□□□□ -0.04
BRCC3P46736 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
BRCC3P46736 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
BRCC3P46736 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
BRCC3P46736 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.81□□□□□ -0.04
BRCC3P46736 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
BRCC3P46736 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
BRCC3P46736 AGAP10P-201ENST00000454844 2418 ntBASIC14.81□□□□□ -0.04
BRCC3P46736 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.81□□□□□ -0.04
BRCC3P46736 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BRCC3P46736 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.8□□□□□ -0.04
BRCC3P46736 Z98885.3-201ENST00000624882 1757 ntBASIC14.8□□□□□ -0.04
BRCC3P46736 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
BRCC3P46736 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BRCC3P46736 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC14.8□□□□□ -0.04
BRCC3P46736 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
BRCC3P46736 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BRCC3P46736 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
BRCC3P46736 STX3-207ENST00000633708 3111 ntTSL 5 BASIC14.8□□□□□ -0.04
BRCC3P46736 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BRCC3P46736 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.8□□□□□ -0.04
BRCC3P46736 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
BRCC3P46736 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
BRCC3P46736 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.8□□□□□ -0.04
BRCC3P46736 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
BRCC3P46736 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
BRCC3P46736 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
BRCC3P46736 GGTLC4P-201ENST00000402176 664 ntBASIC14.8□□□□□ -0.04
BRCC3P46736 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
BRCC3P46736 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC14.8□□□□□ -0.04
BRCC3P46736 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
BRCC3P46736 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
BRCC3P46736 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms