Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC022364.1-202ENST00000617468 2409 ntBASIC11.55□□□□□ -0.56
NKX2-1P43699 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC11.55□□□□□ -0.56
NKX2-1P43699 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
NKX2-1P43699 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
NKX2-1P43699 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
NKX2-1P43699 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
NKX2-1P43699 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
NKX2-1P43699 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
NKX2-1P43699 SNORA50C-201ENST00000408535 133 ntBASIC11.55□□□□□ -0.56
NKX2-1P43699 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
NKX2-1P43699 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC11.55□□□□□ -0.56
NKX2-1P43699 AC003958.1-201ENST00000435883 421 ntBASIC11.55□□□□□ -0.56
NKX2-1P43699 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
NKX2-1P43699 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
NKX2-1P43699 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
NKX2-1P43699 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC11.55□□□□□ -0.56
NKX2-1P43699 REEP4-207ENST00000523293 913 ntTSL 3 BASIC11.55□□□□□ -0.56
NKX2-1P43699 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC11.55□□□□□ -0.56
NKX2-1P43699 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC11.55□□□□□ -0.56
NKX2-1P43699 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC11.55□□□□□ -0.56
NKX2-1P43699 CLUHP6-201ENST00000580789 941 ntBASIC11.55□□□□□ -0.56
NKX2-1P43699 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC11.55□□□□□ -0.56
NKX2-1P43699 AC005498.2-205ENST00000593218 784 ntBASIC11.55□□□□□ -0.56
NKX2-1P43699 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
NKX2-1P43699 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC11.55□□□□□ -0.56
NKX2-1P43699 SNORA50.1-201ENST00000628590 135 ntBASIC11.55□□□□□ -0.56
NKX2-1P43699 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
NKX2-1P43699 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
NKX2-1P43699 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC11.55□□□□□ -0.56
NKX2-1P43699 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
NKX2-1P43699 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
NKX2-1P43699 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC11.55□□□□□ -0.56
NKX2-1P43699 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
NKX2-1P43699 SRPK3-208ENST00000489426 4479 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
NKX2-1P43699 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
NKX2-1P43699 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
NKX2-1P43699 FAM95B1-212ENST00000592873 4692 ntBASIC11.55□□□□□ -0.56
NKX2-1P43699 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
NKX2-1P43699 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC11.55□□□□□ -0.56
NKX2-1P43699 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC11.55□□□□□ -0.56
NKX2-1P43699 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
NKX2-1P43699 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC11.55□□□□□ -0.56
NKX2-1P43699 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
NKX2-1P43699 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NKX2-1P43699 PIK3CD-202ENST00000377346 5203 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NKX2-1P43699 SLC7A15P-201ENST00000424028 1363 ntBASIC11.54□□□□□ -0.56
NKX2-1P43699 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC11.54□□□□□ -0.56
NKX2-1P43699 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
NKX2-1P43699 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC11.54□□□□□ -0.56
NKX2-1P43699 AC015819.3-201ENST00000624305 2674 ntBASIC11.54□□□□□ -0.56
NKX2-1P43699 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC11.54□□□□□ -0.56
NKX2-1P43699 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NKX2-1P43699 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
NKX2-1P43699 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC11.54□□□□□ -0.56
NKX2-1P43699 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
NKX2-1P43699 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
NKX2-1P43699 CAMKK2-205ENST00000392474 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
NKX2-1P43699 MKL1-210ENST00000614754 3917 ntTSL 5 BASIC11.54□□□□□ -0.56
NKX2-1P43699 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
NKX2-1P43699 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
NKX2-1P43699 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
NKX2-1P43699 CACNA2D2-205ENST00000429770 5304 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
NKX2-1P43699 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
NKX2-1P43699 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
NKX2-1P43699 NKAP-201ENST00000371410 5963 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NKX2-1P43699 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NKX2-1P43699 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
NKX2-1P43699 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
NKX2-1P43699 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
NKX2-1P43699 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC11.54□□□□□ -0.56
NKX2-1P43699 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC11.54□□□□□ -0.56
NKX2-1P43699 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC11.54□□□□□ -0.56
NKX2-1P43699 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
NKX2-1P43699 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC11.54□□□□□ -0.56
NKX2-1P43699 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
NKX2-1P43699 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC11.54□□□□□ -0.56
NKX2-1P43699 INGX-202ENST00000489074 768 ntBASIC11.54□□□□□ -0.56
NKX2-1P43699 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
NKX2-1P43699 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
NKX2-1P43699 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
NKX2-1P43699 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC11.54□□□□□ -0.56
NKX2-1P43699 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
NKX2-1P43699 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
NKX2-1P43699 KCNAB2-206ENST00000378097 4201 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
NKX2-1P43699 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NKX2-1P43699 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC11.54□□□□□ -0.56
NKX2-1P43699 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC11.54□□□□□ -0.56
NKX2-1P43699 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
NKX2-1P43699 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
NKX2-1P43699 STX3-207ENST00000633708 3111 ntTSL 5 BASIC11.54□□□□□ -0.56
NKX2-1P43699 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
NKX2-1P43699 LINC00638-201ENST00000555578 2518 ntBASIC11.54□□□□□ -0.56
NKX2-1P43699 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NKX2-1P43699 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NKX2-1P43699 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NKX2-1P43699 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NKX2-1P43699 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
NKX2-1P43699 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC11.54□□□□□ -0.56
NKX2-1P43699 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
NKX2-1P43699 MYO1C-202ENST00000361007 4734 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms