Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC073548.1-201ENST00000624088 1882 ntBASIC15.06■□□□□ 0
SSR1P43307 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SSR1P43307 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC15.05■□□□□ 0
SSR1P43307 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC15.05■□□□□ 0
SSR1P43307 AC099521.2-201ENST00000619354 2036 ntBASIC15.05■□□□□ 0
SSR1P43307 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC15.05■□□□□ 0
SSR1P43307 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC15.05■□□□□ 0
SSR1P43307 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC15.05■□□□□ 0
SSR1P43307 OS9-206ENST00000435406 2346 ntTSL 2 BASIC15.05■□□□□ 0
SSR1P43307 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
SSR1P43307 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
SSR1P43307 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SSR1P43307 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC15.05■□□□□ 0
SSR1P43307 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC15.05■□□□□ -0
SSR1P43307 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
SSR1P43307 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.05■□□□□ -0
SSR1P43307 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.05■□□□□ -0
SSR1P43307 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.05■□□□□ -0
SSR1P43307 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.05■□□□□ -0
SSR1P43307 FAM58BP-201ENST00000439056 645 ntBASIC15.05■□□□□ -0
SSR1P43307 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC15.05■□□□□ -0
SSR1P43307 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.05■□□□□ -0
SSR1P43307 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.05■□□□□ -0
SSR1P43307 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC15.05■□□□□ -0
SSR1P43307 AC008805.1-201ENST00000590892 364 ntBASIC15.05■□□□□ -0
SSR1P43307 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC15.05■□□□□ -0
SSR1P43307 AL162426.1-201ENST00000624141 743 ntBASIC15.05■□□□□ -0
SSR1P43307 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC15.05■□□□□ -0
SSR1P43307 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC15.05■□□□□ -0
SSR1P43307 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.05■□□□□ -0
SSR1P43307 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.05■□□□□ -0
SSR1P43307 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC15.05■□□□□ -0
SSR1P43307 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SSR1P43307 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC15.05■□□□□ -0
SSR1P43307 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SSR1P43307 CCT8L1P-201ENST00000465400 1674 ntBASIC15.05■□□□□ -0
SSR1P43307 AC144522.1-201ENST00000625111 1658 ntBASIC15.05■□□□□ -0
SSR1P43307 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
SSR1P43307 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC15.05■□□□□ -0
SSR1P43307 GOLGA8EP-201ENST00000530246 1959 ntBASIC15.05■□□□□ -0
SSR1P43307 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SSR1P43307 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC15.05■□□□□ -0
SSR1P43307 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC15.05■□□□□ -0
SSR1P43307 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC15.05■□□□□ -0
SSR1P43307 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
SSR1P43307 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SSR1P43307 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC15.05■□□□□ -0
SSR1P43307 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SSR1P43307 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC15.05■□□□□ -0
SSR1P43307 HSPB7-201ENST00000311890 2892 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
SSR1P43307 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC15.05■□□□□ -0
SSR1P43307 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC15.05■□□□□ -0
SSR1P43307 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SSR1P43307 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
SSR1P43307 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
SSR1P43307 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SSR1P43307 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC15.04■□□□□ -0
SSR1P43307 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SSR1P43307 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SSR1P43307 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SSR1P43307 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC15.04■□□□□ -0
SSR1P43307 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SSR1P43307 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SSR1P43307 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC15.04■□□□□ -0
SSR1P43307 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC15.04■□□□□ -0
SSR1P43307 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SSR1P43307 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SSR1P43307 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.04■□□□□ -0
SSR1P43307 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC15.04■□□□□ -0
SSR1P43307 AC063926.2-201ENST00000623766 1308 ntBASIC15.04■□□□□ -0
SSR1P43307 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SSR1P43307 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.04■□□□□ -0
SSR1P43307 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.04■□□□□ -0
SSR1P43307 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.04■□□□□ -0
SSR1P43307 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SSR1P43307 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC15.04■□□□□ -0
SSR1P43307 AL354877.1-201ENST00000424412 413 ntBASIC15.04■□□□□ -0
SSR1P43307 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
SSR1P43307 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC15.04■□□□□ -0
SSR1P43307 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.04■□□□□ -0
SSR1P43307 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.04■□□□□ -0
SSR1P43307 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC15.04■□□□□ -0
SSR1P43307 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.04■□□□□ -0
SSR1P43307 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.04■□□□□ -0
SSR1P43307 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SSR1P43307 AC009542.2-202ENST00000619004 1067 ntBASIC15.04■□□□□ -0
SSR1P43307 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
SSR1P43307 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
SSR1P43307 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
SSR1P43307 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SSR1P43307 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC15.04■□□□□ -0
SSR1P43307 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC15.04■□□□□ -0
SSR1P43307 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SSR1P43307 CACNA2D2-205ENST00000429770 5304 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
SSR1P43307 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC15.04■□□□□ -0
SSR1P43307 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC15.04■□□□□ -0
SSR1P43307 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
SSR1P43307 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SSR1P43307 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC15.03■□□□□ -0
SSR1P43307 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms