Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 TGFA-206ENST00000445399 812 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LTBRP36941 HNRNPA1P73-201ENST00000446472 928 ntBASIC14.08□□□□□ -0.16
LTBRP36941 JPT1-205ENST00000470924 663 ntTSL 5 BASIC14.08□□□□□ -0.16
LTBRP36941 RN7SL789P-201ENST00000478944 293 ntBASIC14.08□□□□□ -0.16
LTBRP36941 RN7SL363P-201ENST00000482412 273 ntBASIC14.08□□□□□ -0.16
LTBRP36941 AC008808.2-201ENST00000510349 569 ntTSL 3 BASIC14.08□□□□□ -0.16
LTBRP36941 STMN4-203ENST00000519614 1273 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LTBRP36941 ZNF268-208ENST00000539248 759 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LTBRP36941 ZNF268-212ENST00000542711 861 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LTBRP36941 HNRNPA1P11-201ENST00000580106 956 ntBASIC14.08□□□□□ -0.16
LTBRP36941 NSRP1-213ENST00000584423 482 ntTSL 2 BASIC14.08□□□□□ -0.16
LTBRP36941 BX510359.7-201ENST00000619819 630 ntBASIC14.08□□□□□ -0.16
LTBRP36941 PACRG-AS3-204ENST00000620150 567 ntTSL 4 BASIC14.08□□□□□ -0.16
LTBRP36941 GOLGA8EP-201ENST00000530246 1959 ntBASIC14.08□□□□□ -0.16
LTBRP36941 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.08□□□□□ -0.16
LTBRP36941 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
LTBRP36941 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LTBRP36941 ECI2-207ENST00000465828 1548 ntTSL 5 BASIC14.08□□□□□ -0.16
LTBRP36941 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LTBRP36941 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LTBRP36941 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LTBRP36941 LINC00337-201ENST00000429480 1302 ntTSL 2 BASIC14.08□□□□□ -0.16
LTBRP36941 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LTBRP36941 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
LTBRP36941 AP000437.1-201ENST00000624057 2085 ntBASIC14.08□□□□□ -0.16
LTBRP36941 AL513497.1-201ENST00000624273 2083 ntBASIC14.08□□□□□ -0.16
LTBRP36941 STK25-235ENST00000543554 2556 ntTSL 2 BASIC14.08□□□□□ -0.16
LTBRP36941 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LTBRP36941 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC14.08□□□□□ -0.16
LTBRP36941 CCDC42-201ENST00000293845 1374 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
LTBRP36941 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LTBRP36941 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
LTBRP36941 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
LTBRP36941 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
LTBRP36941 AC023824.1-201ENST00000562945 2975 ntBASIC14.07□□□□□ -0.16
LTBRP36941 GLB1-203ENST00000399402 2512 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
LTBRP36941 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LTBRP36941 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
LTBRP36941 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LTBRP36941 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LTBRP36941 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LTBRP36941 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LTBRP36941 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LTBRP36941 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LTBRP36941 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LTBRP36941 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
LTBRP36941 MYL3-201ENST00000292327 924 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LTBRP36941 VGLL1-201ENST00000370634 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LTBRP36941 GSG1L2-201ENST00000399363 882 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
LTBRP36941 RPSAP61-201ENST00000412542 878 ntBASIC14.07□□□□□ -0.16
LTBRP36941 PLAC9P1-203ENST00000440031 223 ntBASIC14.07□□□□□ -0.16
LTBRP36941 PRSS45-201ENST00000442359 687 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LTBRP36941 DDX11L8-201ENST00000535849 366 ntBASIC14.07□□□□□ -0.16
LTBRP36941 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC14.07□□□□□ -0.16
LTBRP36941 CR936218.2-201ENST00000574252 759 ntTSL 3 BASIC14.07□□□□□ -0.16
LTBRP36941 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC14.07□□□□□ -0.16
LTBRP36941 DUX4L33-201ENST00000635217 958 ntBASIC14.07□□□□□ -0.16
LTBRP36941 AL590094.1-206ENST00000635959 478 ntTSL 5 BASIC14.07□□□□□ -0.16
LTBRP36941 AL590094.1-209ENST00000637260 499 ntTSL 5 BASIC14.07□□□□□ -0.16
LTBRP36941 AC005906.2-208ENST00000638655 1286 ntTSL 5 BASIC14.07□□□□□ -0.16
LTBRP36941 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
LTBRP36941 ATF4P4-201ENST00000393544 1930 ntBASIC14.07□□□□□ -0.16
LTBRP36941 FAHD2A-204ENST00000447036 1366 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
LTBRP36941 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
LTBRP36941 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LTBRP36941 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.07□□□□□ -0.16
LTBRP36941 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
LTBRP36941 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
LTBRP36941 AC011239.2-201ENST00000624820 1489 ntBASIC14.06□□□□□ -0.16
LTBRP36941 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LTBRP36941 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.06□□□□□ -0.16
LTBRP36941 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LTBRP36941 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LTBRP36941 TRIML2-207ENST00000512729 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LTBRP36941 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.06□□□□□ -0.16
LTBRP36941 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LTBRP36941 OR7E122P-201ENST00000383606 1017 ntBASIC14.06□□□□□ -0.16
LTBRP36941 SUMO1-202ENST00000392245 1071 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
LTBRP36941 PPP1R2P10-201ENST00000393023 595 ntBASIC14.06□□□□□ -0.16
LTBRP36941 KRTAP10-12-201ENST00000400365 873 ntAPPRIS P2 BASIC14.06□□□□□ -0.16
LTBRP36941 IL1RN-205ENST00000409930 848 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LTBRP36941 CIDEC-204ENST00000430427 877 ntTSL 3 BASIC14.06□□□□□ -0.16
LTBRP36941 TMEM256P1-201ENST00000430550 340 ntBASIC14.06□□□□□ -0.16
LTBRP36941 PTPA-219ENST00000435305 530 ntTSL 2 BASIC14.06□□□□□ -0.16
LTBRP36941 AC008267.3-201ENST00000448776 712 ntBASIC14.06□□□□□ -0.16
LTBRP36941 TCEA3-204ENST00000461794 713 ntTSL 3 BASIC14.06□□□□□ -0.16
LTBRP36941 EFNA5-204ENST00000509503 637 ntTSL 5 BASIC14.06□□□□□ -0.16
LTBRP36941 AC022634.2-201ENST00000521504 382 ntTSL 3 BASIC14.06□□□□□ -0.16
LTBRP36941 AC090589.3-201ENST00000524412 574 ntTSL 5 BASIC14.06□□□□□ -0.16
LTBRP36941 MIR4309-201ENST00000582498 83 ntBASIC14.06□□□□□ -0.16
LTBRP36941 MIR4526-201ENST00000583168 87 ntBASIC14.06□□□□□ -0.16
LTBRP36941 BAP1-211ENST00000615113 489 ntBASIC14.06□□□□□ -0.16
LTBRP36941 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
LTBRP36941 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LTBRP36941 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.06□□□□□ -0.16
LTBRP36941 AP001267.2-201ENST00000532619 2086 ntBASIC14.06□□□□□ -0.16
LTBRP36941 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LTBRP36941 TUBA3GP-201ENST00000410028 1325 ntBASIC14.06□□□□□ -0.16
LTBRP36941 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LTBRP36941 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms