Protein–RNA interactions for Protein: P13073

COX4I1, Cytochrome c oxidase subunit 4 isoform 1, mitochondrial, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1P13073 AL136301.1-201ENST00000615830 422 ntBASIC13.54□□□□□ -0.24
COX4I1P13073 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
COX4I1P13073 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.54□□□□□ -0.24
COX4I1P13073 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC13.54□□□□□ -0.24
COX4I1P13073 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
COX4I1P13073 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COX4I1P13073 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
COX4I1P13073 LINC00115-201ENST00000473798 1317 ntBASIC13.54□□□□□ -0.24
COX4I1P13073 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.54□□□□□ -0.24
COX4I1P13073 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
COX4I1P13073 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COX4I1P13073 NUDT9-203ENST00000473942 2458 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
COX4I1P13073 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
COX4I1P13073 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COX4I1P13073 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
COX4I1P13073 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COX4I1P13073 AC007541.1-201ENST00000570282 1469 ntBASIC13.54□□□□□ -0.24
COX4I1P13073 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
COX4I1P13073 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COX4I1P13073 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC13.54□□□□□ -0.24
COX4I1P13073 LAS1L-201ENST00000374804 2261 ntTSL 2 BASIC13.53□□□□□ -0.24
COX4I1P13073 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COX4I1P13073 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
COX4I1P13073 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COX4I1P13073 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
COX4I1P13073 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
COX4I1P13073 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
COX4I1P13073 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
COX4I1P13073 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COX4I1P13073 CCDC186-201ENST00000369285 2035 ntTSL 2 BASIC13.53□□□□□ -0.24
COX4I1P13073 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC13.53□□□□□ -0.24
COX4I1P13073 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
COX4I1P13073 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
COX4I1P13073 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
COX4I1P13073 MIR326-201ENST00000362220 95 ntBASIC13.53□□□□□ -0.24
COX4I1P13073 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.53□□□□□ -0.24
COX4I1P13073 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.53□□□□□ -0.24
COX4I1P13073 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
COX4I1P13073 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
COX4I1P13073 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
COX4I1P13073 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.53□□□□□ -0.24
COX4I1P13073 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.53□□□□□ -0.24
COX4I1P13073 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COX4I1P13073 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.53□□□□□ -0.24
COX4I1P13073 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COX4I1P13073 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.53□□□□□ -0.24
COX4I1P13073 AL590640.2-201ENST00000457038 527 ntBASIC13.53□□□□□ -0.24
COX4I1P13073 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
COX4I1P13073 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.53□□□□□ -0.24
COX4I1P13073 AC106760.1-201ENST00000508690 800 ntBASIC13.53□□□□□ -0.24
COX4I1P13073 AC093214.1-201ENST00000511688 1107 ntBASIC13.53□□□□□ -0.24
COX4I1P13073 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.53□□□□□ -0.24
COX4I1P13073 MAX-218ENST00000557746 571 ntTSL 4 BASIC13.53□□□□□ -0.24
COX4I1P13073 AC025279.2-201ENST00000569730 653 ntBASIC13.53□□□□□ -0.24
COX4I1P13073 RN7SL713P-201ENST00000582127 302 ntBASIC13.53□□□□□ -0.24
COX4I1P13073 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.53□□□□□ -0.24
COX4I1P13073 AC093512.1-201ENST00000617969 520 ntBASIC13.53□□□□□ -0.24
COX4I1P13073 AL591471.1-201ENST00000621855 229 ntBASIC13.53□□□□□ -0.24
COX4I1P13073 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
COX4I1P13073 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.53□□□□□ -0.24
COX4I1P13073 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
COX4I1P13073 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
COX4I1P13073 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
COX4I1P13073 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COX4I1P13073 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COX4I1P13073 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COX4I1P13073 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
COX4I1P13073 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
COX4I1P13073 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC13.53□□□□□ -0.24
COX4I1P13073 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC13.53□□□□□ -0.24
COX4I1P13073 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
COX4I1P13073 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
COX4I1P13073 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COX4I1P13073 ABCC4-206ENST00000536256 2840 ntTSL 2 BASIC13.53□□□□□ -0.24
COX4I1P13073 ZNF564-201ENST00000339282 2935 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COX4I1P13073 USO1-201ENST00000264904 4135 ntTSL 2 BASIC13.53□□□□□ -0.24
COX4I1P13073 ITFG1-204ENST00000544001 1849 ntTSL 2 BASIC13.53□□□□□ -0.24
COX4I1P13073 SARS-202ENST00000369923 1882 ntTSL 5 BASIC13.53□□□□□ -0.24
COX4I1P13073 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
COX4I1P13073 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
COX4I1P13073 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
COX4I1P13073 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
COX4I1P13073 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
COX4I1P13073 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
COX4I1P13073 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
COX4I1P13073 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
COX4I1P13073 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
COX4I1P13073 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
COX4I1P13073 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.52□□□□□ -0.25
COX4I1P13073 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.52□□□□□ -0.25
COX4I1P13073 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC13.52□□□□□ -0.25
COX4I1P13073 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.52□□□□□ -0.25
COX4I1P13073 RNA5SP486-201ENST00000515961 83 ntBASIC13.52□□□□□ -0.25
COX4I1P13073 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.52□□□□□ -0.25
COX4I1P13073 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
COX4I1P13073 AC140658.4-201ENST00000561990 352 ntBASIC13.52□□□□□ -0.25
COX4I1P13073 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
COX4I1P13073 AL033527.5-201ENST00000641382 801 ntBASIC13.52□□□□□ -0.25
COX4I1P13073 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
COX4I1P13073 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms