Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
POLR3DP05423 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
POLR3DP05423 LINC00265-2P-201ENST00000413372 782 ntBASIC16.77■□□□□ 0.28
POLR3DP05423 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
POLR3DP05423 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC16.77■□□□□ 0.28
POLR3DP05423 RN7SL788P-201ENST00000460504 316 ntBASIC16.77■□□□□ 0.28
POLR3DP05423 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC16.77■□□□□ 0.28
POLR3DP05423 NEU3-207ENST00000534628 746 ntTSL 2 BASIC16.77■□□□□ 0.28
POLR3DP05423 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC16.77■□□□□ 0.28
POLR3DP05423 MIR4649-201ENST00000582839 64 ntBASIC16.77■□□□□ 0.28
POLR3DP05423 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC16.77■□□□□ 0.28
POLR3DP05423 WT1-AS_6.1-201ENST00000614919 121 ntBASIC16.77■□□□□ 0.28
POLR3DP05423 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC16.77■□□□□ 0.28
POLR3DP05423 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
POLR3DP05423 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
POLR3DP05423 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
POLR3DP05423 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
POLR3DP05423 AC130686.1-201ENST00000622936 2466 ntBASIC16.77■□□□□ 0.27
POLR3DP05423 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
POLR3DP05423 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC16.77■□□□□ 0.27
POLR3DP05423 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
POLR3DP05423 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC16.77■□□□□ 0.27
POLR3DP05423 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
POLR3DP05423 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
POLR3DP05423 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
POLR3DP05423 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
POLR3DP05423 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC16.77■□□□□ 0.27
POLR3DP05423 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC16.77■□□□□ 0.27
POLR3DP05423 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
POLR3DP05423 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
POLR3DP05423 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
POLR3DP05423 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC16.77■□□□□ 0.27
POLR3DP05423 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
POLR3DP05423 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
POLR3DP05423 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
POLR3DP05423 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC16.76■□□□□ 0.27
POLR3DP05423 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
POLR3DP05423 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
POLR3DP05423 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
POLR3DP05423 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
POLR3DP05423 AC111170.3-201ENST00000624282 2464 ntBASIC16.76■□□□□ 0.27
POLR3DP05423 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
POLR3DP05423 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
POLR3DP05423 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC16.76■□□□□ 0.27
POLR3DP05423 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
POLR3DP05423 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC16.76■□□□□ 0.27
POLR3DP05423 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC16.76■□□□□ 0.27
POLR3DP05423 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC16.76■□□□□ 0.27
POLR3DP05423 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
POLR3DP05423 PFN2-202ENST00000423691 911 ntTSL 2 BASIC16.76■□□□□ 0.27
POLR3DP05423 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
POLR3DP05423 RGS5-216ENST00000449680 788 ntTSL 3 BASIC16.76■□□□□ 0.27
POLR3DP05423 AC018463.1-201ENST00000456674 917 ntBASIC16.76■□□□□ 0.27
POLR3DP05423 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
POLR3DP05423 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC16.76■□□□□ 0.27
POLR3DP05423 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC16.76■□□□□ 0.27
POLR3DP05423 TMCO5B-205ENST00000530020 894 ntBASIC16.76■□□□□ 0.27
POLR3DP05423 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
POLR3DP05423 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC16.76■□□□□ 0.27
POLR3DP05423 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC16.76■□□□□ 0.27
POLR3DP05423 AC007250.1-201ENST00000608934 338 ntBASIC16.76■□□□□ 0.27
POLR3DP05423 MIR6727-201ENST00000620702 65 ntBASIC16.76■□□□□ 0.27
POLR3DP05423 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC16.76■□□□□ 0.27
POLR3DP05423 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
POLR3DP05423 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
POLR3DP05423 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC16.76■□□□□ 0.27
POLR3DP05423 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
POLR3DP05423 DUT-208ENST00000559540 1441 ntTSL 2 BASIC16.76■□□□□ 0.27
POLR3DP05423 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
POLR3DP05423 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
POLR3DP05423 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
POLR3DP05423 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
POLR3DP05423 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
POLR3DP05423 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
POLR3DP05423 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
POLR3DP05423 AL139158.3-201ENST00000641212 1562 ntBASIC16.76■□□□□ 0.27
POLR3DP05423 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC16.76■□□□□ 0.27
POLR3DP05423 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
POLR3DP05423 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
POLR3DP05423 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC16.76■□□□□ 0.27
POLR3DP05423 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
POLR3DP05423 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
POLR3DP05423 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC16.75■□□□□ 0.27
POLR3DP05423 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
POLR3DP05423 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC16.75■□□□□ 0.27
POLR3DP05423 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
POLR3DP05423 KRT8P43-201ENST00000406052 1458 ntBASIC16.75■□□□□ 0.27
POLR3DP05423 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC16.75■□□□□ 0.27
POLR3DP05423 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
POLR3DP05423 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
POLR3DP05423 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC16.75■□□□□ 0.27
POLR3DP05423 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
POLR3DP05423 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
POLR3DP05423 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
POLR3DP05423 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
POLR3DP05423 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
POLR3DP05423 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
POLR3DP05423 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
POLR3DP05423 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC16.75■□□□□ 0.27
POLR3DP05423 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms