Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
RFPL1O75677 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC14.12□□□□□ -0.15
RFPL1O75677 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC14.12□□□□□ -0.15
RFPL1O75677 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC14.12□□□□□ -0.15
RFPL1O75677 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RFPL1O75677 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC14.12□□□□□ -0.15
RFPL1O75677 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.12□□□□□ -0.15
RFPL1O75677 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.12□□□□□ -0.15
RFPL1O75677 CU633904.3-201ENST00000624042 1029 ntBASIC14.12□□□□□ -0.15
RFPL1O75677 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
RFPL1O75677 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RFPL1O75677 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC14.12□□□□□ -0.15
RFPL1O75677 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RFPL1O75677 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RFPL1O75677 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC14.12□□□□□ -0.15
RFPL1O75677 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RFPL1O75677 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC14.12□□□□□ -0.15
RFPL1O75677 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC14.12□□□□□ -0.15
RFPL1O75677 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.12□□□□□ -0.15
RFPL1O75677 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC14.12□□□□□ -0.15
RFPL1O75677 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RFPL1O75677 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFPL1O75677 GHET1-201ENST00000627071 1906 ntBASIC14.11□□□□□ -0.15
RFPL1O75677 PCDHB19P-202ENST00000625133 2914 ntBASIC14.11□□□□□ -0.15
RFPL1O75677 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.11□□□□□ -0.15
RFPL1O75677 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFPL1O75677 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFPL1O75677 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
RFPL1O75677 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC14.11□□□□□ -0.15
RFPL1O75677 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFPL1O75677 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RFPL1O75677 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFPL1O75677 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFPL1O75677 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFPL1O75677 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFPL1O75677 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
RFPL1O75677 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
RFPL1O75677 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC14.11□□□□□ -0.15
RFPL1O75677 AC092580.1-201ENST00000433998 658 ntBASIC14.11□□□□□ -0.15
RFPL1O75677 AL133466.1-201ENST00000447582 150 ntBASIC14.11□□□□□ -0.15
RFPL1O75677 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC14.11□□□□□ -0.15
RFPL1O75677 RN7SL769P-201ENST00000469386 295 ntBASIC14.11□□□□□ -0.15
RFPL1O75677 SERPINA13P-202ENST00000478994 924 ntBASIC14.11□□□□□ -0.15
RFPL1O75677 AC008620.2-201ENST00000510294 1569 ntBASIC14.11□□□□□ -0.15
RFPL1O75677 PGAM1P5-201ENST00000548011 764 ntBASIC14.11□□□□□ -0.15
RFPL1O75677 AC140658.4-201ENST00000561990 352 ntBASIC14.11□□□□□ -0.15
RFPL1O75677 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC14.11□□□□□ -0.15
RFPL1O75677 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC14.11□□□□□ -0.15
RFPL1O75677 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC14.11□□□□□ -0.15
RFPL1O75677 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC14.11□□□□□ -0.15
RFPL1O75677 AC091812.3-201ENST00000621362 345 ntBASIC14.11□□□□□ -0.15
RFPL1O75677 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.11□□□□□ -0.15
RFPL1O75677 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFPL1O75677 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC14.11□□□□□ -0.15
RFPL1O75677 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RFPL1O75677 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFPL1O75677 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC14.11□□□□□ -0.15
RFPL1O75677 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.11□□□□□ -0.15
RFPL1O75677 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC14.11□□□□□ -0.15
RFPL1O75677 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RFPL1O75677 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.11□□□□□ -0.15
RFPL1O75677 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RFPL1O75677 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RFPL1O75677 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC14.11□□□□□ -0.15
RFPL1O75677 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC14.11□□□□□ -0.15
RFPL1O75677 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RFPL1O75677 AL118506.1-201ENST00000601296 3082 ntBASIC14.11□□□□□ -0.15
RFPL1O75677 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.11□□□□□ -0.15
RFPL1O75677 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
RFPL1O75677 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
RFPL1O75677 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC14.11□□□□□ -0.15
RFPL1O75677 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFPL1O75677 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFPL1O75677 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFPL1O75677 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFPL1O75677 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC14.1□□□□□ -0.15
RFPL1O75677 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RFPL1O75677 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RFPL1O75677 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC14.1□□□□□ -0.15
RFPL1O75677 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC14.1□□□□□ -0.15
RFPL1O75677 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC14.1□□□□□ -0.15
RFPL1O75677 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC14.1□□□□□ -0.15
RFPL1O75677 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RFPL1O75677 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
RFPL1O75677 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
RFPL1O75677 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RFPL1O75677 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RFPL1O75677 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
RFPL1O75677 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
RFPL1O75677 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
RFPL1O75677 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RFPL1O75677 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RFPL1O75677 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC14.1□□□□□ -0.15
RFPL1O75677 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
RFPL1O75677 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RFPL1O75677 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RFPL1O75677 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RFPL1O75677 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.1□□□□□ -0.15
RFPL1O75677 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
RFPL1O75677 KRT18P36-201ENST00000411618 1276 ntBASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms