Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC12.57□□□□□ -0.4
ZIC3O60481 AC011491.1-203ENST00000637688 543 ntBASIC12.57□□□□□ -0.4
ZIC3O60481 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC12.57□□□□□ -0.4
ZIC3O60481 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZIC3O60481 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC12.57□□□□□ -0.4
ZIC3O60481 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZIC3O60481 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.57□□□□□ -0.4
ZIC3O60481 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
ZIC3O60481 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZIC3O60481 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ZIC3O60481 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZIC3O60481 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC12.57□□□□□ -0.4
ZIC3O60481 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZIC3O60481 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC12.57□□□□□ -0.4
ZIC3O60481 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ZIC3O60481 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZIC3O60481 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ZIC3O60481 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZIC3O60481 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
ZIC3O60481 STK3-218ENST00000617590 2485 ntTSL 5 BASIC12.56□□□□□ -0.4
ZIC3O60481 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZIC3O60481 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.56□□□□□ -0.4
ZIC3O60481 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZIC3O60481 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
ZIC3O60481 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.56□□□□□ -0.4
ZIC3O60481 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ZIC3O60481 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZIC3O60481 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZIC3O60481 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZIC3O60481 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZIC3O60481 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
ZIC3O60481 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
ZIC3O60481 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
ZIC3O60481 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZIC3O60481 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ZIC3O60481 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZIC3O60481 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZIC3O60481 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZIC3O60481 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC12.56□□□□□ -0.4
ZIC3O60481 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC12.56□□□□□ -0.4
ZIC3O60481 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
ZIC3O60481 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ZIC3O60481 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
ZIC3O60481 SNORA50C-201ENST00000408535 133 ntBASIC12.56□□□□□ -0.4
ZIC3O60481 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC12.56□□□□□ -0.4
ZIC3O60481 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC12.56□□□□□ -0.4
ZIC3O60481 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC12.56□□□□□ -0.4
ZIC3O60481 IGHV1-12-201ENST00000518307 205 ntBASIC12.56□□□□□ -0.4
ZIC3O60481 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
ZIC3O60481 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC12.56□□□□□ -0.4
ZIC3O60481 AL132994.1-201ENST00000554098 400 ntBASIC12.56□□□□□ -0.4
ZIC3O60481 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC12.56□□□□□ -0.4
ZIC3O60481 RN7SL357P-201ENST00000581065 298 ntBASIC12.56□□□□□ -0.4
ZIC3O60481 RN7SL555P-201ENST00000584742 339 ntBASIC12.56□□□□□ -0.4
ZIC3O60481 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC12.56□□□□□ -0.4
ZIC3O60481 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ZIC3O60481 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC12.56□□□□□ -0.4
ZIC3O60481 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
ZIC3O60481 SNORA50.1-201ENST00000628590 135 ntBASIC12.56□□□□□ -0.4
ZIC3O60481 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZIC3O60481 AF013593.1-201ENST00000458074 1487 ntBASIC12.56□□□□□ -0.4
ZIC3O60481 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZIC3O60481 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZIC3O60481 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZIC3O60481 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZIC3O60481 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
ZIC3O60481 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZIC3O60481 MARK2P9-201ENST00000430958 1727 ntBASIC12.56□□□□□ -0.4
ZIC3O60481 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZIC3O60481 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ZIC3O60481 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZIC3O60481 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC12.56□□□□□ -0.4
ZIC3O60481 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
ZIC3O60481 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
ZIC3O60481 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZIC3O60481 C1R-201ENST00000535233 2211 ntTSL 2 BASIC12.56□□□□□ -0.4
ZIC3O60481 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZIC3O60481 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC12.55□□□□□ -0.4
ZIC3O60481 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZIC3O60481 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZIC3O60481 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
ZIC3O60481 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZIC3O60481 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZIC3O60481 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
ZIC3O60481 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZIC3O60481 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC12.55□□□□□ -0.4
ZIC3O60481 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.55□□□□□ -0.4
ZIC3O60481 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ZIC3O60481 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZIC3O60481 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZIC3O60481 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
ZIC3O60481 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZIC3O60481 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZIC3O60481 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZIC3O60481 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC12.55□□□□□ -0.4
ZIC3O60481 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC12.55□□□□□ -0.4
ZIC3O60481 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZIC3O60481 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ZIC3O60481 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC12.55□□□□□ -0.4
ZIC3O60481 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms