Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KDELR3O43731 AC073869.1-201ENST00000415574 2762 ntBASIC14.15□□□□□ -0.14
KDELR3O43731 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC14.15□□□□□ -0.14
KDELR3O43731 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC14.15□□□□□ -0.14
KDELR3O43731 AC040160.2-201ENST00000623816 1675 ntBASIC14.15□□□□□ -0.14
KDELR3O43731 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
KDELR3O43731 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KDELR3O43731 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
KDELR3O43731 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KDELR3O43731 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KDELR3O43731 RNVU1-8-201ENST00000364272 125 ntBASIC14.15□□□□□ -0.14
KDELR3O43731 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC14.15□□□□□ -0.14
KDELR3O43731 RN7SL181P-201ENST00000462921 277 ntBASIC14.15□□□□□ -0.14
KDELR3O43731 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC14.15□□□□□ -0.14
KDELR3O43731 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC14.15□□□□□ -0.14
KDELR3O43731 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC14.15□□□□□ -0.14
KDELR3O43731 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
KDELR3O43731 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC14.15□□□□□ -0.14
KDELR3O43731 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC14.15□□□□□ -0.14
KDELR3O43731 AC140113.1-201ENST00000603467 169 ntBASIC14.15□□□□□ -0.14
KDELR3O43731 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
KDELR3O43731 AC005618.3-201ENST00000624928 458 ntBASIC14.15□□□□□ -0.14
KDELR3O43731 LINC00244-201ENST00000625073 613 ntBASIC14.15□□□□□ -0.14
KDELR3O43731 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC14.15□□□□□ -0.14
KDELR3O43731 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KDELR3O43731 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
KDELR3O43731 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KDELR3O43731 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KDELR3O43731 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
KDELR3O43731 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
KDELR3O43731 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KDELR3O43731 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KDELR3O43731 AC092053.3-201ENST00000641308 4975 ntBASIC14.15□□□□□ -0.14
KDELR3O43731 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
KDELR3O43731 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC14.15□□□□□ -0.14
KDELR3O43731 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
KDELR3O43731 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
KDELR3O43731 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KDELR3O43731 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.15□□□□□ -0.14
KDELR3O43731 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
KDELR3O43731 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
KDELR3O43731 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.14□□□□□ -0.15
KDELR3O43731 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
KDELR3O43731 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
KDELR3O43731 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
KDELR3O43731 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
KDELR3O43731 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
KDELR3O43731 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
KDELR3O43731 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
KDELR3O43731 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
KDELR3O43731 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KDELR3O43731 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
KDELR3O43731 AC005840.4-201ENST00000541242 2494 ntBASIC14.14□□□□□ -0.15
KDELR3O43731 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
KDELR3O43731 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
KDELR3O43731 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC14.14□□□□□ -0.15
KDELR3O43731 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KDELR3O43731 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KDELR3O43731 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KDELR3O43731 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
KDELR3O43731 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KDELR3O43731 AC106827.1-201ENST00000366454 431 ntBASIC14.14□□□□□ -0.15
KDELR3O43731 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
KDELR3O43731 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KDELR3O43731 MIR33B-201ENST00000385104 96 ntBASIC14.14□□□□□ -0.15
KDELR3O43731 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
KDELR3O43731 DKKL1P1-201ENST00000400550 698 ntBASIC14.14□□□□□ -0.15
KDELR3O43731 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
KDELR3O43731 GGTLC4P-201ENST00000402176 664 ntBASIC14.14□□□□□ -0.15
KDELR3O43731 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
KDELR3O43731 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC14.14□□□□□ -0.15
KDELR3O43731 AL354861.1-201ENST00000445213 355 ntBASIC14.14□□□□□ -0.15
KDELR3O43731 AC098935.1-201ENST00000446057 611 ntBASIC14.14□□□□□ -0.15
KDELR3O43731 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
KDELR3O43731 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC14.14□□□□□ -0.15
KDELR3O43731 RPL18AP3-201ENST00000462885 528 ntBASIC14.14□□□□□ -0.15
KDELR3O43731 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC14.14□□□□□ -0.15
KDELR3O43731 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC14.14□□□□□ -0.15
KDELR3O43731 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC14.14□□□□□ -0.15
KDELR3O43731 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC14.14□□□□□ -0.15
KDELR3O43731 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC14.14□□□□□ -0.15
KDELR3O43731 COG4-212ENST00000564653 590 ntTSL 5 BASIC14.14□□□□□ -0.15
KDELR3O43731 NUDT4P2-201ENST00000578341 546 ntBASIC14.14□□□□□ -0.15
KDELR3O43731 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
KDELR3O43731 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC14.14□□□□□ -0.15
KDELR3O43731 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC14.14□□□□□ -0.15
KDELR3O43731 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
KDELR3O43731 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KDELR3O43731 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KDELR3O43731 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
KDELR3O43731 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC14.14□□□□□ -0.15
KDELR3O43731 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
KDELR3O43731 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC14.14□□□□□ -0.15
KDELR3O43731 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
KDELR3O43731 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
KDELR3O43731 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
KDELR3O43731 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
KDELR3O43731 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
KDELR3O43731 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
KDELR3O43731 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms