Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PFDN6O15212 MARK2P5-201ENST00000507649 634 ntBASIC14.14□□□□□ -0.15
PFDN6O15212 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.14□□□□□ -0.15
PFDN6O15212 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC14.14□□□□□ -0.15
PFDN6O15212 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
PFDN6O15212 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PFDN6O15212 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC14.14□□□□□ -0.15
PFDN6O15212 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PFDN6O15212 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC14.14□□□□□ -0.15
PFDN6O15212 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
PFDN6O15212 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC14.14□□□□□ -0.15
PFDN6O15212 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
PFDN6O15212 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC14.14□□□□□ -0.15
PFDN6O15212 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC14.14□□□□□ -0.15
PFDN6O15212 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PFDN6O15212 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC14.14□□□□□ -0.15
PFDN6O15212 PPFIA4-201ENST00000272198 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PFDN6O15212 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PFDN6O15212 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PFDN6O15212 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PFDN6O15212 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
PFDN6O15212 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PFDN6O15212 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
PFDN6O15212 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC14.14□□□□□ -0.15
PFDN6O15212 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PFDN6O15212 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
PFDN6O15212 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PFDN6O15212 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.13□□□□□ -0.15
PFDN6O15212 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
PFDN6O15212 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
PFDN6O15212 ITGAL-201ENST00000356798 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PFDN6O15212 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.13□□□□□ -0.15
PFDN6O15212 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.13□□□□□ -0.15
PFDN6O15212 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC14.13□□□□□ -0.15
PFDN6O15212 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PFDN6O15212 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PFDN6O15212 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.13□□□□□ -0.15
PFDN6O15212 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC14.13□□□□□ -0.15
PFDN6O15212 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PFDN6O15212 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
PFDN6O15212 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
PFDN6O15212 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PFDN6O15212 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PFDN6O15212 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.13□□□□□ -0.15
PFDN6O15212 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.13□□□□□ -0.15
PFDN6O15212 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PFDN6O15212 NPPA-201ENST00000376476 728 ntTSL 3 BASIC14.13□□□□□ -0.15
PFDN6O15212 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC14.13□□□□□ -0.15
PFDN6O15212 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PFDN6O15212 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PFDN6O15212 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
PFDN6O15212 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
PFDN6O15212 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC14.13□□□□□ -0.15
PFDN6O15212 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.13□□□□□ -0.15
PFDN6O15212 RPS2P32-201ENST00000439199 892 ntBASIC14.13□□□□□ -0.15
PFDN6O15212 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC14.13□□□□□ -0.15
PFDN6O15212 AC004898.1-201ENST00000451057 766 ntBASIC14.13□□□□□ -0.15
PFDN6O15212 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.13□□□□□ -0.15
PFDN6O15212 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.13□□□□□ -0.15
PFDN6O15212 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.13□□□□□ -0.15
PFDN6O15212 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
PFDN6O15212 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14.13□□□□□ -0.15
PFDN6O15212 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
PFDN6O15212 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
PFDN6O15212 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.13□□□□□ -0.15
PFDN6O15212 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PFDN6O15212 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.13□□□□□ -0.15
PFDN6O15212 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.13□□□□□ -0.15
PFDN6O15212 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PFDN6O15212 NAP1L6-202ENST00000641404 1222 ntBASIC14.13□□□□□ -0.15
PFDN6O15212 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PFDN6O15212 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC14.13□□□□□ -0.15
PFDN6O15212 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PFDN6O15212 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PFDN6O15212 LINC01815-202ENST00000641468 1409 ntBASIC14.13□□□□□ -0.15
PFDN6O15212 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PFDN6O15212 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PFDN6O15212 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
PFDN6O15212 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
PFDN6O15212 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
PFDN6O15212 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC14.13□□□□□ -0.15
PFDN6O15212 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
PFDN6O15212 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC14.13□□□□□ -0.15
PFDN6O15212 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PFDN6O15212 TUBB4AP1-201ENST00000450755 1325 ntBASIC14.13□□□□□ -0.15
PFDN6O15212 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.13□□□□□ -0.15
PFDN6O15212 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PFDN6O15212 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PFDN6O15212 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
PFDN6O15212 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
PFDN6O15212 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PFDN6O15212 CES1P1-201ENST00000421606 1704 ntBASIC14.12□□□□□ -0.15
PFDN6O15212 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC14.12□□□□□ -0.15
PFDN6O15212 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.12□□□□□ -0.15
PFDN6O15212 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
PFDN6O15212 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PFDN6O15212 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PFDN6O15212 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
PFDN6O15212 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PFDN6O15212 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms