Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SRRM4A7MD48 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC11.32□□□□□ -0.6
SRRM4A7MD48 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC11.32□□□□□ -0.6
SRRM4A7MD48 AC013355.1-201ENST00000562625 723 ntBASIC11.32□□□□□ -0.6
SRRM4A7MD48 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC11.32□□□□□ -0.6
SRRM4A7MD48 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC11.32□□□□□ -0.6
SRRM4A7MD48 RN7SL455P-201ENST00000580629 282 ntBASIC11.32□□□□□ -0.6
SRRM4A7MD48 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC11.32□□□□□ -0.6
SRRM4A7MD48 MIR3188-201ENST00000583494 85 ntBASIC11.32□□□□□ -0.6
SRRM4A7MD48 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC11.32□□□□□ -0.6
SRRM4A7MD48 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SRRM4A7MD48 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SRRM4A7MD48 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
SRRM4A7MD48 AL355102.3-201ENST00000554299 1678 ntBASIC11.32□□□□□ -0.6
SRRM4A7MD48 AC093462.1-201ENST00000621167 1683 ntBASIC11.32□□□□□ -0.6
SRRM4A7MD48 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SRRM4A7MD48 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC11.32□□□□□ -0.6
SRRM4A7MD48 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC11.32□□□□□ -0.6
SRRM4A7MD48 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC11.32□□□□□ -0.6
SRRM4A7MD48 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SRRM4A7MD48 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC11.32□□□□□ -0.6
SRRM4A7MD48 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SRRM4A7MD48 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC11.32□□□□□ -0.6
SRRM4A7MD48 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
SRRM4A7MD48 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC11.32□□□□□ -0.6
SRRM4A7MD48 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC11.32□□□□□ -0.6
SRRM4A7MD48 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SRRM4A7MD48 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
SRRM4A7MD48 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SRRM4A7MD48 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SRRM4A7MD48 SARS-202ENST00000369923 1882 ntTSL 5 BASIC11.32□□□□□ -0.6
SRRM4A7MD48 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
SRRM4A7MD48 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
SRRM4A7MD48 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC11.31□□□□□ -0.6
SRRM4A7MD48 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
SRRM4A7MD48 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SRRM4A7MD48 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC11.31□□□□□ -0.6
SRRM4A7MD48 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
SRRM4A7MD48 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SRRM4A7MD48 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SRRM4A7MD48 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC11.31□□□□□ -0.6
SRRM4A7MD48 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SRRM4A7MD48 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SRRM4A7MD48 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SRRM4A7MD48 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SRRM4A7MD48 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SRRM4A7MD48 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SRRM4A7MD48 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SRRM4A7MD48 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SRRM4A7MD48 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC11.31□□□□□ -0.6
SRRM4A7MD48 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC11.31□□□□□ -0.6
SRRM4A7MD48 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
SRRM4A7MD48 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
SRRM4A7MD48 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC11.31□□□□□ -0.6
SRRM4A7MD48 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC11.31□□□□□ -0.6
SRRM4A7MD48 OR8T1P-201ENST00000421347 918 ntBASIC11.31□□□□□ -0.6
SRRM4A7MD48 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC11.31□□□□□ -0.6
SRRM4A7MD48 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC11.31□□□□□ -0.6
SRRM4A7MD48 AC104306.2-201ENST00000451877 341 ntBASIC11.31□□□□□ -0.6
SRRM4A7MD48 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC11.31□□□□□ -0.6
SRRM4A7MD48 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC11.31□□□□□ -0.6
SRRM4A7MD48 RCC2P8-201ENST00000502779 1035 ntBASIC11.31□□□□□ -0.6
SRRM4A7MD48 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC11.31□□□□□ -0.6
SRRM4A7MD48 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SRRM4A7MD48 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC11.31□□□□□ -0.6
SRRM4A7MD48 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC11.31□□□□□ -0.6
SRRM4A7MD48 DERL2-202ENST00000570848 657 ntTSL 5 BASIC11.31□□□□□ -0.6
SRRM4A7MD48 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC11.31□□□□□ -0.6
SRRM4A7MD48 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC11.31□□□□□ -0.6
SRRM4A7MD48 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
SRRM4A7MD48 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SRRM4A7MD48 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
SRRM4A7MD48 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC11.31□□□□□ -0.6
SRRM4A7MD48 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC11.31□□□□□ -0.6
SRRM4A7MD48 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC11.31□□□□□ -0.6
SRRM4A7MD48 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SRRM4A7MD48 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC11.31□□□□□ -0.6
SRRM4A7MD48 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
SRRM4A7MD48 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC11.31□□□□□ -0.6
SRRM4A7MD48 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SRRM4A7MD48 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
SRRM4A7MD48 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
SRRM4A7MD48 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SRRM4A7MD48 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC11.31□□□□□ -0.6
SRRM4A7MD48 KRT8P21-201ENST00000430398 1491 ntBASIC11.31□□□□□ -0.6
SRRM4A7MD48 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC11.31□□□□□ -0.6
SRRM4A7MD48 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SRRM4A7MD48 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SRRM4A7MD48 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC11.31□□□□□ -0.6
SRRM4A7MD48 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC11.31□□□□□ -0.6
SRRM4A7MD48 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SRRM4A7MD48 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SRRM4A7MD48 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SRRM4A7MD48 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SRRM4A7MD48 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
SRRM4A7MD48 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SRRM4A7MD48 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC11.3□□□□□ -0.6
SRRM4A7MD48 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SRRM4A7MD48 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SRRM4A7MD48 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms