Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 CHRNA7-223ENST00000637033 3204 ntTSL 5 BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 AC110048.1-201ENST00000604293 2157 ntBASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 LOXL3-204ENST00000409549 2897 ntTSL 2 BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 GZF1-202ENST00000377051 4740 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 SNORA50C-201ENST00000408535 133 ntBASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 HNRNPA1P27-201ENST00000412087 955 ntBASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 HMGA1P1-201ENST00000415560 1062 ntBASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 AC093433.1-201ENST00000458048 571 ntBASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 FADS2-205ENST00000517839 469 ntTSL 3 BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 SNHG9-202ENST00000564014 471 ntBASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 AC004449.1-201ENST00000564240 433 ntBASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 AC099568.2-201ENST00000609194 695 ntBASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 SNORA50.1-201ENST00000628590 135 ntBASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 MAGED1-201ENST00000326587 2747 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
RCL1Q9Y2P8 KCNJ10-201ENST00000368089 5528 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
RCL1Q9Y2P8 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
RCL1Q9Y2P8 OPRK1-201ENST00000265572 5014 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
RCL1Q9Y2P8 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC11.52□□□□□ -0.56
RCL1Q9Y2P8 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
RCL1Q9Y2P8 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
RCL1Q9Y2P8 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
RCL1Q9Y2P8 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
RCL1Q9Y2P8 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC11.52□□□□□ -0.56
RCL1Q9Y2P8 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC11.52□□□□□ -0.56
RCL1Q9Y2P8 PARP10-205ENST00000525773 3404 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
RCL1Q9Y2P8 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
RCL1Q9Y2P8 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
RCL1Q9Y2P8 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
RCL1Q9Y2P8 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC11.52□□□□□ -0.57
RCL1Q9Y2P8 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
RCL1Q9Y2P8 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RCL1Q9Y2P8 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
RCL1Q9Y2P8 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
RCL1Q9Y2P8 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
RCL1Q9Y2P8 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RCL1Q9Y2P8 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC11.52□□□□□ -0.57
RCL1Q9Y2P8 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC11.52□□□□□ -0.57
RCL1Q9Y2P8 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC11.52□□□□□ -0.57
RCL1Q9Y2P8 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.57
RCL1Q9Y2P8 CICP12-201ENST00000455801 843 ntBASIC11.52□□□□□ -0.57
RCL1Q9Y2P8 KRT18P15-201ENST00000458108 1291 ntBASIC11.52□□□□□ -0.57
RCL1Q9Y2P8 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC11.52□□□□□ -0.57
RCL1Q9Y2P8 AC004890.2-204ENST00000481968 304 ntBASIC11.52□□□□□ -0.57
RCL1Q9Y2P8 AC022137.2-201ENST00000503482 481 ntBASIC11.52□□□□□ -0.57
RCL1Q9Y2P8 AC055876.2-201ENST00000531834 546 ntBASIC11.52□□□□□ -0.57
RCL1Q9Y2P8 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
RCL1Q9Y2P8 AC092552.1-201ENST00000547243 906 ntBASIC11.52□□□□□ -0.57
RCL1Q9Y2P8 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RCL1Q9Y2P8 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
RCL1Q9Y2P8 CLUHP6-201ENST00000580789 941 ntBASIC11.52□□□□□ -0.57
RCL1Q9Y2P8 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC11.52□□□□□ -0.57
RCL1Q9Y2P8 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC11.52□□□□□ -0.57
RCL1Q9Y2P8 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC11.52□□□□□ -0.57
RCL1Q9Y2P8 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC11.52□□□□□ -0.57
RCL1Q9Y2P8 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC11.52□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms