Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 RARS-210ENST00000626454 177 ntTSL 5 BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 USP39-207ENST00000450066 2086 ntTSL 2 BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
DNMT3BQ9UBC3 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
DNMT3BQ9UBC3 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
DNMT3BQ9UBC3 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
DNMT3BQ9UBC3 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
DNMT3BQ9UBC3 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
DNMT3BQ9UBC3 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
DNMT3BQ9UBC3 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
DNMT3BQ9UBC3 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
DNMT3BQ9UBC3 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
DNMT3BQ9UBC3 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC14.5□□□□□ -0.09
DNMT3BQ9UBC3 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
DNMT3BQ9UBC3 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC14.5□□□□□ -0.09
DNMT3BQ9UBC3 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.5□□□□□ -0.09
DNMT3BQ9UBC3 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
DNMT3BQ9UBC3 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC14.5□□□□□ -0.09
DNMT3BQ9UBC3 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
DNMT3BQ9UBC3 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC14.5□□□□□ -0.09
DNMT3BQ9UBC3 AL929302.1-201ENST00000426556 871 ntBASIC14.5□□□□□ -0.09
DNMT3BQ9UBC3 AC005722.1-201ENST00000431878 964 ntBASIC14.5□□□□□ -0.09
DNMT3BQ9UBC3 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
DNMT3BQ9UBC3 NALT1-202ENST00000450304 437 ntTSL 3 BASIC14.5□□□□□ -0.09
DNMT3BQ9UBC3 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC14.5□□□□□ -0.09
DNMT3BQ9UBC3 RBM4-207ENST00000506523 654 ntTSL 3 BASIC14.5□□□□□ -0.09
DNMT3BQ9UBC3 CASP3-205ENST00000517513 964 ntTSL 5 BASIC14.5□□□□□ -0.09
DNMT3BQ9UBC3 AL359219.1-201ENST00000556311 934 ntBASIC14.5□□□□□ -0.09
DNMT3BQ9UBC3 AC023968.2-201ENST00000560593 1049 ntBASIC14.5□□□□□ -0.09
DNMT3BQ9UBC3 EIF5AP2-201ENST00000585668 1047 ntBASIC14.5□□□□□ -0.09
DNMT3BQ9UBC3 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC14.5□□□□□ -0.09
DNMT3BQ9UBC3 AP003392.6-201ENST00000607709 325 ntBASIC14.5□□□□□ -0.09
DNMT3BQ9UBC3 GARS-210ENST00000627489 324 ntTSL 4 BASIC14.5□□□□□ -0.09
DNMT3BQ9UBC3 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
DNMT3BQ9UBC3 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC14.5□□□□□ -0.09
DNMT3BQ9UBC3 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
DNMT3BQ9UBC3 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
DNMT3BQ9UBC3 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
DNMT3BQ9UBC3 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
DNMT3BQ9UBC3 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
DNMT3BQ9UBC3 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
DNMT3BQ9UBC3 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
DNMT3BQ9UBC3 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC14.5□□□□□ -0.09
DNMT3BQ9UBC3 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
DNMT3BQ9UBC3 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
DNMT3BQ9UBC3 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
DNMT3BQ9UBC3 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.5□□□□□ -0.09
DNMT3BQ9UBC3 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC14.5□□□□□ -0.09
DNMT3BQ9UBC3 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
DNMT3BQ9UBC3 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
DNMT3BQ9UBC3 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
DNMT3BQ9UBC3 DDC-204ENST00000426377 1700 ntTSL 3 BASIC14.49□□□□□ -0.09
DNMT3BQ9UBC3 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
DNMT3BQ9UBC3 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
DNMT3BQ9UBC3 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
DNMT3BQ9UBC3 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
DNMT3BQ9UBC3 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
DNMT3BQ9UBC3 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
DNMT3BQ9UBC3 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
DNMT3BQ9UBC3 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
DNMT3BQ9UBC3 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
DNMT3BQ9UBC3 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
DNMT3BQ9UBC3 LINC02486-201ENST00000604157 3000 ntBASIC14.49□□□□□ -0.09
DNMT3BQ9UBC3 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
DNMT3BQ9UBC3 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
DNMT3BQ9UBC3 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
DNMT3BQ9UBC3 AC022080.1-201ENST00000366255 781 ntBASIC14.49□□□□□ -0.09
DNMT3BQ9UBC3 PIFO-201ENST00000369737 746 ntTSL 2 BASIC14.49□□□□□ -0.09
DNMT3BQ9UBC3 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
DNMT3BQ9UBC3 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC14.49□□□□□ -0.09
DNMT3BQ9UBC3 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
DNMT3BQ9UBC3 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC14.49□□□□□ -0.09
DNMT3BQ9UBC3 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC14.49□□□□□ -0.09
DNMT3BQ9UBC3 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC14.49□□□□□ -0.09
DNMT3BQ9UBC3 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms