Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
VRK1Q99986 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
VRK1Q99986 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
VRK1Q99986 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
VRK1Q99986 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
VRK1Q99986 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
VRK1Q99986 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
VRK1Q99986 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
VRK1Q99986 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
VRK1Q99986 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
VRK1Q99986 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
VRK1Q99986 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC12.54□□□□□ -0.4
VRK1Q99986 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VRK1Q99986 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VRK1Q99986 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
VRK1Q99986 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC12.54□□□□□ -0.4
VRK1Q99986 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
VRK1Q99986 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.54□□□□□ -0.4
VRK1Q99986 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VRK1Q99986 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VRK1Q99986 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
VRK1Q99986 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VRK1Q99986 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
VRK1Q99986 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
VRK1Q99986 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VRK1Q99986 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VRK1Q99986 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
VRK1Q99986 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VRK1Q99986 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
VRK1Q99986 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VRK1Q99986 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VRK1Q99986 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VRK1Q99986 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VRK1Q99986 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VRK1Q99986 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
VRK1Q99986 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VRK1Q99986 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC12.54□□□□□ -0.4
VRK1Q99986 GCOM2-201ENST00000509133 1104 ntBASIC12.54□□□□□ -0.4
VRK1Q99986 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC12.54□□□□□ -0.4
VRK1Q99986 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC12.54□□□□□ -0.4
VRK1Q99986 RN7SL774P-201ENST00000577467 290 ntBASIC12.54□□□□□ -0.4
VRK1Q99986 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
VRK1Q99986 BX088702.1-201ENST00000610784 235 ntBASIC12.54□□□□□ -0.4
VRK1Q99986 NAP1L6-202ENST00000641404 1222 ntBASIC12.54□□□□□ -0.4
VRK1Q99986 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VRK1Q99986 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC12.54□□□□□ -0.4
VRK1Q99986 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
VRK1Q99986 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VRK1Q99986 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
VRK1Q99986 AL354702.1-201ENST00000442006 1960 ntBASIC12.54□□□□□ -0.4
VRK1Q99986 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VRK1Q99986 AL157791.1-201ENST00000553667 1699 ntBASIC12.54□□□□□ -0.4
VRK1Q99986 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VRK1Q99986 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
VRK1Q99986 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VRK1Q99986 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
VRK1Q99986 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VRK1Q99986 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VRK1Q99986 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.53□□□□□ -0.4
VRK1Q99986 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC12.53□□□□□ -0.4
VRK1Q99986 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VRK1Q99986 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
VRK1Q99986 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VRK1Q99986 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC12.53□□□□□ -0.4
VRK1Q99986 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
VRK1Q99986 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VRK1Q99986 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
VRK1Q99986 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
VRK1Q99986 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VRK1Q99986 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC12.53□□□□□ -0.4
VRK1Q99986 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
VRK1Q99986 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
VRK1Q99986 MEX3B-202ENST00000558133 4333 ntBASIC12.53□□□□□ -0.4
VRK1Q99986 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VRK1Q99986 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
VRK1Q99986 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VRK1Q99986 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.53□□□□□ -0.4
VRK1Q99986 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VRK1Q99986 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
VRK1Q99986 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC12.53□□□□□ -0.4
VRK1Q99986 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VRK1Q99986 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.53□□□□□ -0.4
VRK1Q99986 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC12.53□□□□□ -0.4
VRK1Q99986 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
VRK1Q99986 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VRK1Q99986 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VRK1Q99986 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VRK1Q99986 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC12.53□□□□□ -0.4
VRK1Q99986 HNRNPA1P41-201ENST00000397777 928 ntBASIC12.53□□□□□ -0.4
VRK1Q99986 SLC16A6P1-201ENST00000413214 1059 ntBASIC12.53□□□□□ -0.4
VRK1Q99986 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC12.53□□□□□ -0.4
VRK1Q99986 KLF2P1-201ENST00000447438 1042 ntBASIC12.53□□□□□ -0.4
VRK1Q99986 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC12.53□□□□□ -0.4
VRK1Q99986 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC12.53□□□□□ -0.4
VRK1Q99986 UPF3AP2-201ENST00000457924 1132 ntBASIC12.53□□□□□ -0.4
VRK1Q99986 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
VRK1Q99986 AC090857.1-201ENST00000527400 390 ntBASIC12.53□□□□□ -0.4
VRK1Q99986 AC131206.1-201ENST00000538078 1211 ntBASIC12.53□□□□□ -0.4
VRK1Q99986 CSH2-206ENST00000560142 749 ntTSL 5 BASIC12.53□□□□□ -0.4
VRK1Q99986 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms