Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
RFT1Q96AA3 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RFT1Q96AA3 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
RFT1Q96AA3 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RFT1Q96AA3 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC12.53□□□□□ -0.4
RFT1Q96AA3 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RFT1Q96AA3 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RFT1Q96AA3 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RFT1Q96AA3 KRT8P28-201ENST00000433288 1390 ntBASIC12.53□□□□□ -0.4
RFT1Q96AA3 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RFT1Q96AA3 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC12.53□□□□□ -0.4
RFT1Q96AA3 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC12.53□□□□□ -0.4
RFT1Q96AA3 AKAP13-202ENST00000394510 9128 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
RFT1Q96AA3 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.53□□□□□ -0.4
RFT1Q96AA3 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RFT1Q96AA3 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RFT1Q96AA3 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RFT1Q96AA3 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
RFT1Q96AA3 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RFT1Q96AA3 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RFT1Q96AA3 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
RFT1Q96AA3 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
RFT1Q96AA3 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
RFT1Q96AA3 AL022313.4-201ENST00000562756 2046 ntBASIC12.52□□□□□ -0.4
RFT1Q96AA3 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
RFT1Q96AA3 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
RFT1Q96AA3 PI4KAP2-201ENST00000360806 2080 ntBASIC12.52□□□□□ -0.4
RFT1Q96AA3 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RFT1Q96AA3 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RFT1Q96AA3 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
RFT1Q96AA3 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC12.52□□□□□ -0.41
RFT1Q96AA3 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RFT1Q96AA3 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
RFT1Q96AA3 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC12.52□□□□□ -0.41
RFT1Q96AA3 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC12.52□□□□□ -0.41
RFT1Q96AA3 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RFT1Q96AA3 ZBTB12BP-201ENST00000314232 1122 ntBASIC12.52□□□□□ -0.41
RFT1Q96AA3 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RFT1Q96AA3 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RFT1Q96AA3 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RFT1Q96AA3 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.52□□□□□ -0.41
RFT1Q96AA3 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RFT1Q96AA3 MPV17-205ENST00000402310 906 ntTSL 5 BASIC12.52□□□□□ -0.41
RFT1Q96AA3 BCRP2-202ENST00000447763 634 ntBASIC12.52□□□□□ -0.41
RFT1Q96AA3 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC12.52□□□□□ -0.41
RFT1Q96AA3 BCRP6-201ENST00000510112 632 ntBASIC12.52□□□□□ -0.41
RFT1Q96AA3 BCRP7-201ENST00000511549 544 ntBASIC12.52□□□□□ -0.41
RFT1Q96AA3 POLD4-211ENST00000539074 714 ntTSL 3 BASIC12.52□□□□□ -0.41
RFT1Q96AA3 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RFT1Q96AA3 GNRHR2-203ENST00000581100 1187 ntBASIC12.52□□□□□ -0.41
RFT1Q96AA3 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RFT1Q96AA3 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC12.52□□□□□ -0.41
RFT1Q96AA3 MVK-217ENST00000639206 367 ntTSL 5 BASIC12.52□□□□□ -0.41
RFT1Q96AA3 AC002472.3-201ENST00000640124 621 ntBASIC12.52□□□□□ -0.41
RFT1Q96AA3 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RFT1Q96AA3 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RFT1Q96AA3 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RFT1Q96AA3 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
RFT1Q96AA3 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RFT1Q96AA3 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC12.52□□□□□ -0.41
RFT1Q96AA3 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RFT1Q96AA3 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.52□□□□□ -0.41
RFT1Q96AA3 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RFT1Q96AA3 NQO2-205ENST00000380455 10084 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RFT1Q96AA3 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
RFT1Q96AA3 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
RFT1Q96AA3 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
RFT1Q96AA3 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
RFT1Q96AA3 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
RFT1Q96AA3 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RFT1Q96AA3 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RFT1Q96AA3 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RFT1Q96AA3 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
RFT1Q96AA3 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RFT1Q96AA3 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RFT1Q96AA3 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RFT1Q96AA3 AP001972.5-201ENST00000624624 2338 ntBASIC12.51□□□□□ -0.41
RFT1Q96AA3 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RFT1Q96AA3 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC12.51□□□□□ -0.41
RFT1Q96AA3 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
RFT1Q96AA3 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC12.51□□□□□ -0.41
RFT1Q96AA3 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RFT1Q96AA3 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RFT1Q96AA3 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC12.51□□□□□ -0.41
RFT1Q96AA3 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
RFT1Q96AA3 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RFT1Q96AA3 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RFT1Q96AA3 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.51□□□□□ -0.41
RFT1Q96AA3 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
RFT1Q96AA3 TNRC6C-207ENST00000588847 8527 ntAPPRIS P4 TSL 5 BASIC12.51□□□□□ -0.41
RFT1Q96AA3 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RFT1Q96AA3 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RFT1Q96AA3 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RFT1Q96AA3 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
RFT1Q96AA3 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
RFT1Q96AA3 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC12.51□□□□□ -0.41
RFT1Q96AA3 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RFT1Q96AA3 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC12.51□□□□□ -0.41
RFT1Q96AA3 FAM8A4P-201ENST00000435433 1213 ntBASIC12.51□□□□□ -0.41
RFT1Q96AA3 RN7SL837P-201ENST00000463010 287 ntBASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms