Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 NDUFB10P1-201ENST00000567319 521 ntBASIC12.73□□□□□ -0.37
ATG4DQ86TL0 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 CU633904.3-201ENST00000624042 1029 ntBASIC12.73□□□□□ -0.37
ATG4DQ86TL0 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 CDK7-214ENST00000626796 358 ntTSL 5 BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 AC004623.1-201ENST00000624592 2127 ntBASIC12.73□□□□□ -0.37
ATG4DQ86TL0 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 AL358781.1-202ENST00000321081 1360 ntBASIC12.72□□□□□ -0.37
ATG4DQ86TL0 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 Z98885.3-201ENST00000624882 1757 ntBASIC12.72□□□□□ -0.37
ATG4DQ86TL0 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 ISCA2P1-201ENST00000425548 448 ntBASIC12.72□□□□□ -0.37
ATG4DQ86TL0 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 MSRA-203ENST00000441698 788 ntTSL 2 BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 RERG-205ENST00000537647 935 ntTSL 2 BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 AC079328.1-201ENST00000560358 952 ntBASIC12.72□□□□□ -0.37
ATG4DQ86TL0 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 AL133499.1-201ENST00000596207 608 ntBASIC12.72□□□□□ -0.37
ATG4DQ86TL0 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 AC126335.2-201ENST00000623362 4637 ntBASIC12.72□□□□□ -0.37
ATG4DQ86TL0 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 AL445250.1-201ENST00000641671 2259 ntBASIC12.72□□□□□ -0.37
ATG4DQ86TL0 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms