Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 SRL-202ENST00000537996 1814 ntTSL 2 BASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 AC020741.1-201ENST00000381217 2079 ntTSL 2 BASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 TMEM186-201ENST00000333050 1448 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 SNORA50D-201ENST00000408059 134 ntBASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 FDPS-206ENST00000467076 1178 ntAPPRIS ALT1 TSL 3 BASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 AC025576.1-201ENST00000536455 462 ntTSL 5 BASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 AC133555.4-201ENST00000569081 152 ntBASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 MIR4539-201ENST00000579784 60 ntBASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 MIR4459-201ENST00000581837 66 ntBASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 AC012615.6-203ENST00000590531 272 ntTSL 2 BASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 LINC02427-202ENST00000605270 1059 ntTSL 2 BASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 CR383656.2-201ENST00000548656 2254 ntBASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 AC023509.3-202ENST00000591834 1609 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 LINC00544-201ENST00000400540 1031 ntTSL 5 BASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 AL357558.2-201ENST00000431915 425 ntTSL 2 BASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 Z84721.1-201ENST00000438841 372 ntBASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 RN7SL638P-201ENST00000494527 290 ntBASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 RN7SL87P-201ENST00000497657 288 ntBASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 ATP2A2-211ENST00000552636 529 ntTSL 4 BASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 MIR4763-201ENST00000581461 92 ntBASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 NAMA-207ENST00000605707 1748 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 ANKDD1A-207ENST00000496660 1477 ntTSL 2 BASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 VOPP1-204ENST00000418904 1317 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 SMIM4-201ENST00000307106 274 ntTSL 2 BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 AL358876.2-201ENST00000424689 477 ntTSL 3 BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 AADAC-202ENST00000488869 719 ntTSL 2 BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 ALG10-202ENST00000538927 571 ntTSL 5 BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 AC092634.5-206ENST00000593670 812 ntTSL 5 BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 ZNF677-207ENST00000598806 701 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 MGST3-204ENST00000367888 778 ntTSL 3 BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 AC096677.3-201ENST00000413162 387 ntBASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 CIDEC-204ENST00000430427 877 ntTSL 3 BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 AC069277.1-201ENST00000433639 1083 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 AL358215.1-201ENST00000481350 482 ntTSL 5 BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 MTND6P4-201ENST00000506002 522 ntBASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 COX14-204ENST00000550654 580 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 DNPEP-205ENST00000373972 1578 ntTSL 2 BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 WFDC3-201ENST00000243938 1000 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 SERF2-205ENST00000403425 690 ntTSL 2 BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 AL450322.2-201ENST00000421629 759 ntTSL 3 BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 GAPDHP29-201ENST00000429913 985 ntBASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 AP000343.1-201ENST00000440602 385 ntBASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 DMKN-244ENST00000480502 820 ntAPPRIS ALT2 TSL 3 BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 AC079340.2-201ENST00000504957 495 ntTSL 2 BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 ROM1-205ENST00000534093 862 ntAPPRIS ALT2 TSL 2 BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 AL117379.1-201ENST00000619319 677 ntBASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 ELMOD3-201ENST00000315658 2685 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 MIR100HG-219ENST00000533109 1794 ntTSL 5 BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 AC108024.1-201ENST00000626286 1721 ntBASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 753.1 ms