Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RC3H1Q5TC82 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RC3H1Q5TC82 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
RC3H1Q5TC82 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RC3H1Q5TC82 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RC3H1Q5TC82 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.23■□□□□ 0.35
RC3H1Q5TC82 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RC3H1Q5TC82 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RC3H1Q5TC82 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RC3H1Q5TC82 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RC3H1Q5TC82 MRPS9-201ENST00000258455 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RC3H1Q5TC82 EEF1G-201ENST00000329251 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RC3H1Q5TC82 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RC3H1Q5TC82 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RC3H1Q5TC82 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.23■□□□□ 0.35
RC3H1Q5TC82 RANGRF-201ENST00000226105 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RC3H1Q5TC82 MUC1-207ENST00000368392 1032 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RC3H1Q5TC82 MUC1-208ENST00000368393 937 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RC3H1Q5TC82 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RC3H1Q5TC82 SNORD23-201ENST00000408876 110 ntBASIC17.23■□□□□ 0.35
RC3H1Q5TC82 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RC3H1Q5TC82 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC17.23■□□□□ 0.35
RC3H1Q5TC82 AK2P2-201ENST00000439142 405 ntBASIC17.23■□□□□ 0.35
RC3H1Q5TC82 MUC1-213ENST00000462215 1189 ntTSL 2 BASIC17.23■□□□□ 0.35
RC3H1Q5TC82 TSTD1-206ENST00000466967 477 ntTSL 2 BASIC17.23■□□□□ 0.35
RC3H1Q5TC82 RN7SL846P-201ENST00000467429 292 ntBASIC17.23■□□□□ 0.35
RC3H1Q5TC82 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC17.23■□□□□ 0.35
RC3H1Q5TC82 OR52V1P-201ENST00000515557 898 ntBASIC17.23■□□□□ 0.35
RC3H1Q5TC82 NAA38-204ENST00000575208 529 ntTSL 3 BASIC17.23■□□□□ 0.35
RC3H1Q5TC82 AL356740.1-201ENST00000602192 1297 ntBASIC17.23■□□□□ 0.35
RC3H1Q5TC82 Metazoa_SRP.173-201ENST00000614020 273 ntBASIC17.23■□□□□ 0.35
RC3H1Q5TC82 AC138627.1-201ENST00000641127 1257 ntBASIC17.23■□□□□ 0.35
RC3H1Q5TC82 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RC3H1Q5TC82 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RC3H1Q5TC82 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RC3H1Q5TC82 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RC3H1Q5TC82 AC111188.1-201ENST00000525758 1833 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RC3H1Q5TC82 AL031587.5-201ENST00000624344 1849 ntBASIC17.23■□□□□ 0.35
RC3H1Q5TC82 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RC3H1Q5TC82 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RC3H1Q5TC82 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RC3H1Q5TC82 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RC3H1Q5TC82 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RC3H1Q5TC82 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RC3H1Q5TC82 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RC3H1Q5TC82 GOLGA8G-203ENST00000525590 2009 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RC3H1Q5TC82 GOLGA8F-202ENST00000532622 2009 ntAPPRIS P5 TSL 5 BASIC17.23■□□□□ 0.35
RC3H1Q5TC82 AC020763.3-201ENST00000625095 2904 ntBASIC17.23■□□□□ 0.35
RC3H1Q5TC82 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
RC3H1Q5TC82 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC17.23■□□□□ 0.35
RC3H1Q5TC82 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
RC3H1Q5TC82 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC17.22■□□□□ 0.35
RC3H1Q5TC82 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC17.22■□□□□ 0.35
RC3H1Q5TC82 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RC3H1Q5TC82 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RC3H1Q5TC82 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RC3H1Q5TC82 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RC3H1Q5TC82 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC17.22■□□□□ 0.35
RC3H1Q5TC82 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
RC3H1Q5TC82 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RC3H1Q5TC82 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
RC3H1Q5TC82 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RC3H1Q5TC82 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
RC3H1Q5TC82 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RC3H1Q5TC82 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
RC3H1Q5TC82 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
RC3H1Q5TC82 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RC3H1Q5TC82 UCN3-201ENST00000380433 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RC3H1Q5TC82 OLA1P2-201ENST00000395519 1264 ntBASIC17.22■□□□□ 0.35
RC3H1Q5TC82 SERF2-205ENST00000403425 690 ntTSL 2 BASIC17.22■□□□□ 0.35
RC3H1Q5TC82 AC105443.1-201ENST00000433754 712 ntBASIC17.22■□□□□ 0.35
RC3H1Q5TC82 ACTG1P23-201ENST00000437653 1074 ntBASIC17.22■□□□□ 0.35
RC3H1Q5TC82 HNRNPA1P3-201ENST00000440968 551 ntBASIC17.22■□□□□ 0.35
RC3H1Q5TC82 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
RC3H1Q5TC82 C3orf84-203ENST00000545770 706 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
RC3H1Q5TC82 AC092720.1-202ENST00000565824 555 ntTSL 4 BASIC17.22■□□□□ 0.35
RC3H1Q5TC82 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC17.22■□□□□ 0.35
RC3H1Q5TC82 EEF1DP7-201ENST00000580496 513 ntBASIC17.22■□□□□ 0.35
RC3H1Q5TC82 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
RC3H1Q5TC82 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC17.22■□□□□ 0.35
RC3H1Q5TC82 Metazoa_SRP.122-201ENST00000610476 285 ntBASIC17.22■□□□□ 0.35
RC3H1Q5TC82 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RC3H1Q5TC82 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RC3H1Q5TC82 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC17.22■□□□□ 0.35
RC3H1Q5TC82 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RC3H1Q5TC82 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC17.22■□□□□ 0.35
RC3H1Q5TC82 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
RC3H1Q5TC82 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
RC3H1Q5TC82 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RC3H1Q5TC82 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RC3H1Q5TC82 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC17.22■□□□□ 0.35
RC3H1Q5TC82 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RC3H1Q5TC82 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RC3H1Q5TC82 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RC3H1Q5TC82 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC17.21■□□□□ 0.35
RC3H1Q5TC82 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC17.21■□□□□ 0.35
RC3H1Q5TC82 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RC3H1Q5TC82 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
RC3H1Q5TC82 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RC3H1Q5TC82 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 249.4 ms