Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC12.82□□□□□ -0.36
CXCR4P61073 ST13P19-201ENST00000442505 1124 ntBASIC12.82□□□□□ -0.36
CXCR4P61073 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC12.82□□□□□ -0.36
CXCR4P61073 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC12.82□□□□□ -0.36
CXCR4P61073 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC12.82□□□□□ -0.36
CXCR4P61073 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC12.82□□□□□ -0.36
CXCR4P61073 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC12.82□□□□□ -0.36
CXCR4P61073 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC12.82□□□□□ -0.36
CXCR4P61073 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC12.82□□□□□ -0.36
CXCR4P61073 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC12.82□□□□□ -0.36
CXCR4P61073 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC12.82□□□□□ -0.36
CXCR4P61073 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC12.82□□□□□ -0.36
CXCR4P61073 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CXCR4P61073 RPSAP52-203ENST00000622976 1023 ntBASIC12.82□□□□□ -0.36
CXCR4P61073 AC132938.4-201ENST00000623835 848 ntBASIC12.82□□□□□ -0.36
CXCR4P61073 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CXCR4P61073 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CXCR4P61073 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
CXCR4P61073 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CXCR4P61073 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CXCR4P61073 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CXCR4P61073 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
CXCR4P61073 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CXCR4P61073 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CXCR4P61073 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CXCR4P61073 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CXCR4P61073 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC12.82□□□□□ -0.36
CXCR4P61073 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC12.82□□□□□ -0.36
CXCR4P61073 C1R-209ENST00000542285 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CXCR4P61073 MRPL44-201ENST00000258383 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CXCR4P61073 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
CXCR4P61073 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CXCR4P61073 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC12.82□□□□□ -0.36
CXCR4P61073 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
CXCR4P61073 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CXCR4P61073 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CXCR4P61073 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC12.81□□□□□ -0.36
CXCR4P61073 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CXCR4P61073 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CXCR4P61073 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
CXCR4P61073 EFHD1-203ENST00000409708 1817 ntTSL 2 BASIC12.81□□□□□ -0.36
CXCR4P61073 NUSAP1-208ENST00000559596 1629 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
CXCR4P61073 PER1-202ENST00000354903 3115 ntTSL 2 BASIC12.81□□□□□ -0.36
CXCR4P61073 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CXCR4P61073 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CXCR4P61073 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CXCR4P61073 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CXCR4P61073 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CXCR4P61073 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC12.81□□□□□ -0.36
CXCR4P61073 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CXCR4P61073 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CXCR4P61073 GUK1-206ENST00000366723 845 ntTSL 5 BASIC12.81□□□□□ -0.36
CXCR4P61073 MIR770-201ENST00000390219 98 ntBASIC12.81□□□□□ -0.36
CXCR4P61073 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
CXCR4P61073 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CXCR4P61073 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CXCR4P61073 GGCT-205ENST00000409436 954 ntTSL 3 BASIC12.81□□□□□ -0.36
CXCR4P61073 FAM8A4P-201ENST00000435433 1213 ntBASIC12.81□□□□□ -0.36
CXCR4P61073 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC12.81□□□□□ -0.36
CXCR4P61073 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC12.81□□□□□ -0.36
CXCR4P61073 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC12.81□□□□□ -0.36
CXCR4P61073 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
CXCR4P61073 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC12.81□□□□□ -0.36
CXCR4P61073 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC12.81□□□□□ -0.36
CXCR4P61073 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC12.81□□□□□ -0.36
CXCR4P61073 MIR4683-201ENST00000579659 81 ntBASIC12.81□□□□□ -0.36
CXCR4P61073 AC010319.3-201ENST00000597028 470 ntBASIC12.81□□□□□ -0.36
CXCR4P61073 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CXCR4P61073 ABCC4-206ENST00000536256 2840 ntTSL 2 BASIC12.81□□□□□ -0.36
CXCR4P61073 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CXCR4P61073 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC12.81□□□□□ -0.36
CXCR4P61073 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC12.81□□□□□ -0.36
CXCR4P61073 CYP24A1-203ENST00000395955 2227 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CXCR4P61073 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.81□□□□□ -0.36
CXCR4P61073 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CXCR4P61073 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC12.81□□□□□ -0.36
CXCR4P61073 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CXCR4P61073 ITFG1-204ENST00000544001 1849 ntTSL 2 BASIC12.81□□□□□ -0.36
CXCR4P61073 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
CXCR4P61073 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CXCR4P61073 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CXCR4P61073 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CXCR4P61073 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC12.8□□□□□ -0.36
CXCR4P61073 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CXCR4P61073 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CXCR4P61073 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CXCR4P61073 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC12.8□□□□□ -0.36
CXCR4P61073 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC12.8□□□□□ -0.36
CXCR4P61073 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CXCR4P61073 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CXCR4P61073 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CXCR4P61073 GLO1-201ENST00000373365 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CXCR4P61073 AC008040.5-201ENST00000599781 1781 ntBASIC12.8□□□□□ -0.36
CXCR4P61073 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CXCR4P61073 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CXCR4P61073 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CXCR4P61073 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC12.8□□□□□ -0.36
CXCR4P61073 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CXCR4P61073 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CXCR4P61073 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms