Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MTHFRP42898 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MTHFRP42898 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
MTHFRP42898 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.66□□□□□ -0.06
MTHFRP42898 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MTHFRP42898 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
MTHFRP42898 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
MTHFRP42898 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MTHFRP42898 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MTHFRP42898 AC067750.1-201ENST00000608826 6545 ntBASIC14.66□□□□□ -0.06
MTHFRP42898 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
MTHFRP42898 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MTHFRP42898 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MTHFRP42898 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
MTHFRP42898 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MTHFRP42898 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MTHFRP42898 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.65□□□□□ -0.06
MTHFRP42898 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MTHFRP42898 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MTHFRP42898 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MTHFRP42898 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MTHFRP42898 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.65□□□□□ -0.06
MTHFRP42898 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
MTHFRP42898 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MTHFRP42898 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
MTHFRP42898 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
MTHFRP42898 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
MTHFRP42898 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
MTHFRP42898 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC14.65□□□□□ -0.06
MTHFRP42898 AC103592.1-201ENST00000394513 664 ntBASIC14.65□□□□□ -0.06
MTHFRP42898 ACTBP14-201ENST00000411655 1089 ntBASIC14.65□□□□□ -0.06
MTHFRP42898 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC14.65□□□□□ -0.06
MTHFRP42898 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC14.65□□□□□ -0.06
MTHFRP42898 AL080243.1-201ENST00000423293 1060 ntBASIC14.65□□□□□ -0.06
MTHFRP42898 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC14.65□□□□□ -0.06
MTHFRP42898 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC14.65□□□□□ -0.06
MTHFRP42898 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC14.65□□□□□ -0.06
MTHFRP42898 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC14.65□□□□□ -0.06
MTHFRP42898 AC087203.1-201ENST00000532111 1181 ntBASIC14.65□□□□□ -0.06
MTHFRP42898 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC14.65□□□□□ -0.06
MTHFRP42898 RN7SL556P-201ENST00000582856 298 ntBASIC14.65□□□□□ -0.06
MTHFRP42898 AL136982.5-201ENST00000605222 294 ntBASIC14.65□□□□□ -0.06
MTHFRP42898 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC14.65□□□□□ -0.06
MTHFRP42898 AC073869.4-201ENST00000620841 800 ntBASIC14.65□□□□□ -0.06
MTHFRP42898 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC14.65□□□□□ -0.06
MTHFRP42898 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
MTHFRP42898 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.65□□□□□ -0.06
MTHFRP42898 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MTHFRP42898 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MTHFRP42898 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
MTHFRP42898 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
MTHFRP42898 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.65□□□□□ -0.06
MTHFRP42898 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MTHFRP42898 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.65□□□□□ -0.06
MTHFRP42898 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.65□□□□□ -0.06
MTHFRP42898 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.65□□□□□ -0.06
MTHFRP42898 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.65□□□□□ -0.06
MTHFRP42898 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC14.65□□□□□ -0.06
MTHFRP42898 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MTHFRP42898 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MTHFRP42898 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.65□□□□□ -0.06
MTHFRP42898 AC015656.1-201ENST00000624209 3578 ntBASIC14.65□□□□□ -0.06
MTHFRP42898 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MTHFRP42898 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
MTHFRP42898 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
MTHFRP42898 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MTHFRP42898 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
MTHFRP42898 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MTHFRP42898 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MTHFRP42898 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MTHFRP42898 AC215219.1-201ENST00000400706 1817 ntBASIC14.64□□□□□ -0.07
MTHFRP42898 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.64□□□□□ -0.07
MTHFRP42898 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MTHFRP42898 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MTHFRP42898 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MTHFRP42898 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MTHFRP42898 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
MTHFRP42898 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
MTHFRP42898 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
MTHFRP42898 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
MTHFRP42898 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
MTHFRP42898 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
MTHFRP42898 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MTHFRP42898 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MTHFRP42898 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
MTHFRP42898 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC14.64□□□□□ -0.07
MTHFRP42898 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
MTHFRP42898 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MTHFRP42898 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
MTHFRP42898 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MTHFRP42898 RPL3P2-204ENST00000413027 1203 ntBASIC14.64□□□□□ -0.07
MTHFRP42898 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC14.64□□□□□ -0.07
MTHFRP42898 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC14.64□□□□□ -0.07
MTHFRP42898 RNLS-203ENST00000437752 525 ntTSL 2 BASIC14.64□□□□□ -0.07
MTHFRP42898 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC14.64□□□□□ -0.07
MTHFRP42898 AC092903.1-201ENST00000466506 262 ntBASIC14.64□□□□□ -0.07
MTHFRP42898 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC14.64□□□□□ -0.07
MTHFRP42898 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC14.64□□□□□ -0.07
MTHFRP42898 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MTHFRP42898 AC023968.2-201ENST00000560593 1049 ntBASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms