Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC13.53□□□□□ -0.24
HTR1EP28566 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC13.53□□□□□ -0.24
HTR1EP28566 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
HTR1EP28566 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HTR1EP28566 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HTR1EP28566 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HTR1EP28566 PEG13-201ENST00000631594 5667 ntBASIC13.53□□□□□ -0.24
HTR1EP28566 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HTR1EP28566 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HTR1EP28566 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
HTR1EP28566 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HTR1EP28566 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HTR1EP28566 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HTR1EP28566 SALL4P6-201ENST00000429385 1691 ntBASIC13.53□□□□□ -0.24
HTR1EP28566 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HTR1EP28566 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HTR1EP28566 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
HTR1EP28566 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HTR1EP28566 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HTR1EP28566 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HTR1EP28566 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
HTR1EP28566 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HTR1EP28566 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC13.52□□□□□ -0.24
HTR1EP28566 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
HTR1EP28566 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
HTR1EP28566 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HTR1EP28566 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HTR1EP28566 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
HTR1EP28566 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HTR1EP28566 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HTR1EP28566 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
HTR1EP28566 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HTR1EP28566 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HTR1EP28566 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.52□□□□□ -0.25
HTR1EP28566 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC13.52□□□□□ -0.25
HTR1EP28566 AC016700.1-201ENST00000429424 312 ntBASIC13.52□□□□□ -0.25
HTR1EP28566 MBP-227ENST00000526111 581 ntTSL 4 BASIC13.52□□□□□ -0.25
HTR1EP28566 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC13.52□□□□□ -0.25
HTR1EP28566 MIR5572-201ENST00000583188 137 ntBASIC13.52□□□□□ -0.25
HTR1EP28566 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HTR1EP28566 AC008825.2-201ENST00000603374 718 ntBASIC13.52□□□□□ -0.25
HTR1EP28566 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC13.52□□□□□ -0.25
HTR1EP28566 AC244157.2-201ENST00000616239 1006 ntBASIC13.52□□□□□ -0.25
HTR1EP28566 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HTR1EP28566 AC027601.3-201ENST00000622907 509 ntBASIC13.52□□□□□ -0.25
HTR1EP28566 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HTR1EP28566 AC061965.1-201ENST00000560524 1465 ntBASIC13.52□□□□□ -0.25
HTR1EP28566 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HTR1EP28566 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
HTR1EP28566 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
HTR1EP28566 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
HTR1EP28566 AL023775.1-201ENST00000454907 1746 ntBASIC13.52□□□□□ -0.25
HTR1EP28566 AC108024.1-201ENST00000626286 1721 ntBASIC13.52□□□□□ -0.25
HTR1EP28566 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HTR1EP28566 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.52□□□□□ -0.25
HTR1EP28566 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC13.52□□□□□ -0.25
HTR1EP28566 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HTR1EP28566 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
HTR1EP28566 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HTR1EP28566 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
HTR1EP28566 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
HTR1EP28566 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
HTR1EP28566 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
HTR1EP28566 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HTR1EP28566 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HTR1EP28566 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HTR1EP28566 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HTR1EP28566 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
HTR1EP28566 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HTR1EP28566 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
HTR1EP28566 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC13.51□□□□□ -0.25
HTR1EP28566 AC005014.1-201ENST00000432006 2976 ntBASIC13.51□□□□□ -0.25
HTR1EP28566 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HTR1EP28566 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
HTR1EP28566 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.51□□□□□ -0.25
HTR1EP28566 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC13.51□□□□□ -0.25
HTR1EP28566 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
HTR1EP28566 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HTR1EP28566 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
HTR1EP28566 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HTR1EP28566 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
HTR1EP28566 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HTR1EP28566 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
HTR1EP28566 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
HTR1EP28566 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC13.51□□□□□ -0.25
HTR1EP28566 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
HTR1EP28566 AC025183.3-201ENST00000623526 1482 ntBASIC13.51□□□□□ -0.25
HTR1EP28566 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
HTR1EP28566 AC091046.1-201ENST00000331871 207 ntBASIC13.51□□□□□ -0.25
HTR1EP28566 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
HTR1EP28566 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
HTR1EP28566 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.51□□□□□ -0.25
HTR1EP28566 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
HTR1EP28566 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HTR1EP28566 FTLP1-201ENST00000449155 526 ntBASIC13.51□□□□□ -0.25
HTR1EP28566 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HTR1EP28566 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC13.51□□□□□ -0.25
HTR1EP28566 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HTR1EP28566 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC13.51□□□□□ -0.25
HTR1EP28566 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms