Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC012044.1-201ENST00000603431 297 ntBASIC13.89□□□□□ -0.19
CDH3P22223 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC13.89□□□□□ -0.19
CDH3P22223 AL353770.1-201ENST00000614915 403 ntBASIC13.89□□□□□ -0.19
CDH3P22223 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CDH3P22223 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC13.89□□□□□ -0.19
CDH3P22223 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.89□□□□□ -0.19
CDH3P22223 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDH3P22223 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDH3P22223 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDH3P22223 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC13.89□□□□□ -0.19
CDH3P22223 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC13.89□□□□□ -0.19
CDH3P22223 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDH3P22223 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.89□□□□□ -0.19
CDH3P22223 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.89□□□□□ -0.19
CDH3P22223 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDH3P22223 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.89□□□□□ -0.19
CDH3P22223 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDH3P22223 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDH3P22223 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC13.89□□□□□ -0.19
CDH3P22223 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDH3P22223 AC015909.3-201ENST00000572855 1794 ntBASIC13.88□□□□□ -0.19
CDH3P22223 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CDH3P22223 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH3P22223 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CDH3P22223 LAP3P2-201ENST00000454686 1454 ntBASIC13.88□□□□□ -0.19
CDH3P22223 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.88□□□□□ -0.19
CDH3P22223 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
CDH3P22223 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDH3P22223 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CDH3P22223 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH3P22223 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH3P22223 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CDH3P22223 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CDH3P22223 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH3P22223 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDH3P22223 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.88□□□□□ -0.19
CDH3P22223 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH3P22223 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC13.88□□□□□ -0.19
CDH3P22223 PTPA-217ENST00000434095 870 ntTSL 2 BASIC13.88□□□□□ -0.19
CDH3P22223 AL161932.2-201ENST00000435436 679 ntBASIC13.88□□□□□ -0.19
CDH3P22223 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC13.88□□□□□ -0.19
CDH3P22223 RN7SL530P-201ENST00000485097 298 ntBASIC13.88□□□□□ -0.19
CDH3P22223 AC008723.1-201ENST00000506922 207 ntBASIC13.88□□□□□ -0.19
CDH3P22223 AC116345.2-201ENST00000512837 523 ntBASIC13.88□□□□□ -0.19
CDH3P22223 AC134698.3-201ENST00000523880 214 ntBASIC13.88□□□□□ -0.19
CDH3P22223 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC13.88□□□□□ -0.19
CDH3P22223 ARL16-210ENST00000574938 751 ntTSL 2 BASIC13.88□□□□□ -0.19
CDH3P22223 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC13.88□□□□□ -0.19
CDH3P22223 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC13.88□□□□□ -0.19
CDH3P22223 MIR6769A-201ENST00000617340 73 ntBASIC13.88□□□□□ -0.19
CDH3P22223 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH3P22223 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
CDH3P22223 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13.88□□□□□ -0.19
CDH3P22223 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.88□□□□□ -0.19
CDH3P22223 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.88□□□□□ -0.19
CDH3P22223 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH3P22223 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CDH3P22223 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC13.88□□□□□ -0.19
CDH3P22223 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC13.88□□□□□ -0.19
CDH3P22223 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDH3P22223 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH3P22223 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH3P22223 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDH3P22223 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC13.88□□□□□ -0.19
CDH3P22223 TP73-201ENST00000346387 4854 ntTSL 5 BASIC13.88□□□□□ -0.19
CDH3P22223 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH3P22223 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.88□□□□□ -0.19
CDH3P22223 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH3P22223 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC13.88□□□□□ -0.19
CDH3P22223 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH3P22223 AC131212.3-201ENST00000624087 4219 ntBASIC13.88□□□□□ -0.19
CDH3P22223 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDH3P22223 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC13.88□□□□□ -0.19
CDH3P22223 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH3P22223 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH3P22223 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH3P22223 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC13.87□□□□□ -0.19
CDH3P22223 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CDH3P22223 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC13.87□□□□□ -0.19
CDH3P22223 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH3P22223 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH3P22223 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH3P22223 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC13.87□□□□□ -0.19
CDH3P22223 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH3P22223 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH3P22223 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH3P22223 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13.87□□□□□ -0.19
CDH3P22223 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CDH3P22223 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH3P22223 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH3P22223 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH3P22223 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CDH3P22223 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH3P22223 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC13.87□□□□□ -0.19
CDH3P22223 MBP-201ENST00000354542 575 ntTSL 2 BASIC13.87□□□□□ -0.19
CDH3P22223 LBH-202ENST00000401506 485 ntTSL 3 BASIC13.87□□□□□ -0.19
CDH3P22223 HLA-DQB2-229ENST00000411527 1059 ntBASIC13.87□□□□□ -0.19
CDH3P22223 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC13.87□□□□□ -0.19
CDH3P22223 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC13.87□□□□□ -0.19
CDH3P22223 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms