Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 CITED2-204ENST00000618718 901 ntTSL 2 BASIC10.83□□□□□ -0.68
RAB4AP20338 BMP2-201ENST00000378827 3601 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RAB4AP20338 FOXJ3-201ENST00000361346 5225 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
RAB4AP20338 LDLR-203ENST00000535915 2768 ntTSL 2 BASIC10.83□□□□□ -0.68
RAB4AP20338 COL11A1-203ENST00000370096 7286 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
RAB4AP20338 SMAP1-203ENST00000370455 3333 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RAB4AP20338 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
RAB4AP20338 DCAF16-201ENST00000382247 4548 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
RAB4AP20338 NSD3-202ENST00000317025 10776 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RAB4AP20338 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RAB4AP20338 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
RAB4AP20338 DGKZ-220ENST00000532868 3118 ntTSL 2 BASIC10.83□□□□□ -0.68
RAB4AP20338 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RAB4AP20338 ACCS-201ENST00000263776 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RAB4AP20338 SLC25A25-205ENST00000432073 3678 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
RAB4AP20338 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RAB4AP20338 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
RAB4AP20338 DNAJB14-205ENST00000442697 6075 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RAB4AP20338 PCDH20-201ENST00000409204 4778 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RAB4AP20338 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC10.83□□□□□ -0.68
RAB4AP20338 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
RAB4AP20338 IKZF4-202ENST00000431367 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RAB4AP20338 ZSCAN31-201ENST00000344279 2619 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RAB4AP20338 PAPLN-208ENST00000555445 4282 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
RAB4AP20338 GLUL-204ENST00000417584 4065 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
RAB4AP20338 LINC01141-203ENST00000426428 2993 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
RAB4AP20338 AGAP10P-201ENST00000454844 2418 ntBASIC10.83□□□□□ -0.68
RAB4AP20338 GCM1-201ENST00000259803 2765 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RAB4AP20338 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RAB4AP20338 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
RAB4AP20338 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
RAB4AP20338 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC10.82□□□□□ -0.68
RAB4AP20338 ALDH4A1-202ENST00000375341 3363 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RAB4AP20338 TRO-201ENST00000173898 4647 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
RAB4AP20338 EGLN3-205ENST00000547327 2849 ntBASIC10.82□□□□□ -0.68
RAB4AP20338 RAD51D-202ENST00000345365 9988 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RAB4AP20338 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RAB4AP20338 TECTB-201ENST00000369422 2713 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RAB4AP20338 CLK3-201ENST00000345005 1846 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RAB4AP20338 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC10.82□□□□□ -0.68
RAB4AP20338 ZMYND11-203ENST00000381591 4229 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
RAB4AP20338 EFHC1-201ENST00000371068 6987 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RAB4AP20338 RUFY4-202ENST00000374155 2977 ntTSL 2 BASIC10.82□□□□□ -0.68
RAB4AP20338 MROH7-204ENST00000409996 2977 ntTSL 5 BASIC10.82□□□□□ -0.68
RAB4AP20338 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
RAB4AP20338 BCL2L11-206ENST00000393256 5086 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
RAB4AP20338 IFNAR2-205ENST00000404220 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
RAB4AP20338 FN1-212ENST00000446046 7952 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
RAB4AP20338 IFFO1-205ENST00000436152 3101 ntTSL 2 BASIC10.82□□□□□ -0.68
RAB4AP20338 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
RAB4AP20338 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
RAB4AP20338 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
RAB4AP20338 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC10.82□□□□□ -0.68
RAB4AP20338 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC10.82□□□□□ -0.68
RAB4AP20338 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC10.82□□□□□ -0.68
RAB4AP20338 AL662844.1-201ENST00000546340 181 ntBASIC10.82□□□□□ -0.68
RAB4AP20338 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC10.82□□□□□ -0.68
RAB4AP20338 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC10.82□□□□□ -0.68
RAB4AP20338 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
RAB4AP20338 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC10.82□□□□□ -0.68
RAB4AP20338 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC10.82□□□□□ -0.68
RAB4AP20338 AC000095.1-201ENST00000603208 874 ntBASIC10.82□□□□□ -0.68
RAB4AP20338 AC007967.4-201ENST00000614700 386 ntBASIC10.82□□□□□ -0.68
RAB4AP20338 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC10.82□□□□□ -0.68
RAB4AP20338 AL033527.5-202ENST00000641632 1098 ntBASIC10.82□□□□□ -0.68
RAB4AP20338 S1PR1-201ENST00000305352 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RAB4AP20338 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC10.82□□□□□ -0.68
RAB4AP20338 GRHL3-203ENST00000356046 2804 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
RAB4AP20338 CLINT1-201ENST00000411809 3440 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
RAB4AP20338 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC10.82□□□□□ -0.68
RAB4AP20338 ZNF574-201ENST00000222339 3309 ntTSL 3 BASIC10.82□□□□□ -0.68
RAB4AP20338 MESD-201ENST00000261758 4264 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RAB4AP20338 C2CD2-201ENST00000329623 5844 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
RAB4AP20338 SOCS6-201ENST00000397942 5848 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RAB4AP20338 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
RAB4AP20338 ADIRF-AS1-203ENST00000609111 3822 ntTSL 2 BASIC10.82□□□□□ -0.68
RAB4AP20338 AP003969.2-201ENST00000623739 2275 ntBASIC10.82□□□□□ -0.68
RAB4AP20338 ABI1-203ENST00000376137 3467 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
RAB4AP20338 KRT8P35-201ENST00000483942 1338 ntBASIC10.82□□□□□ -0.68
RAB4AP20338 SLC36A4-201ENST00000326402 6012 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RAB4AP20338 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
RAB4AP20338 GDPD2-201ENST00000374382 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RAB4AP20338 ANAPC7-203ENST00000455511 3045 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
RAB4AP20338 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
RAB4AP20338 ATG16L1-201ENST00000347464 2915 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
RAB4AP20338 TRAF3IP2-207ENST00000368761 5128 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
RAB4AP20338 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
RAB4AP20338 FCGR3A-206ENST00000443193 2306 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RAB4AP20338 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
RAB4AP20338 SDR16C5-203ENST00000522671 1988 ntTSL 2 BASIC10.81□□□□□ -0.68
RAB4AP20338 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC10.81□□□□□ -0.68
RAB4AP20338 LIN54-201ENST00000340417 6127 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RAB4AP20338 CAST-206ENST00000395812 4506 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
RAB4AP20338 ZMYM5-201ENST00000337963 3268 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
RAB4AP20338 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC10.81□□□□□ -0.68
RAB4AP20338 QRICH1-204ENST00000424300 3009 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
RAB4AP20338 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RAB4AP20338 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC10.81□□□□□ -0.68
RAB4AP20338 MICAL2-203ENST00000379612 6625 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
RAB4AP20338 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms