Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
BRAFP15056 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BRAFP15056 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC14.53□□□□□ -0.08
BRAFP15056 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC14.53□□□□□ -0.08
BRAFP15056 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
BRAFP15056 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BRAFP15056 RHPN1-AS1-201ENST00000518049 1918 ntBASIC14.53□□□□□ -0.08
BRAFP15056 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC14.53□□□□□ -0.08
BRAFP15056 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BRAFP15056 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BRAFP15056 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
BRAFP15056 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BRAFP15056 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
BRAFP15056 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BRAFP15056 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.53□□□□□ -0.08
BRAFP15056 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
BRAFP15056 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC14.53□□□□□ -0.08
BRAFP15056 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
BRAFP15056 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC14.53□□□□□ -0.08
BRAFP15056 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
BRAFP15056 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
BRAFP15056 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.53□□□□□ -0.08
BRAFP15056 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BRAFP15056 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.53□□□□□ -0.08
BRAFP15056 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
BRAFP15056 PUDPP3-201ENST00000445368 636 ntBASIC14.53□□□□□ -0.08
BRAFP15056 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.53□□□□□ -0.08
BRAFP15056 AC104306.2-201ENST00000451877 341 ntBASIC14.53□□□□□ -0.08
BRAFP15056 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
BRAFP15056 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC14.53□□□□□ -0.08
BRAFP15056 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.53□□□□□ -0.08
BRAFP15056 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.53□□□□□ -0.08
BRAFP15056 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.53□□□□□ -0.08
BRAFP15056 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
BRAFP15056 AL118558.3-201ENST00000607414 1079 ntBASIC14.53□□□□□ -0.08
BRAFP15056 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
BRAFP15056 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BRAFP15056 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
BRAFP15056 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BRAFP15056 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
BRAFP15056 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC14.53□□□□□ -0.08
BRAFP15056 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC14.53□□□□□ -0.08
BRAFP15056 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC14.53□□□□□ -0.08
BRAFP15056 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BRAFP15056 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
BRAFP15056 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC14.53□□□□□ -0.08
BRAFP15056 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
BRAFP15056 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
BRAFP15056 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
BRAFP15056 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
BRAFP15056 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
BRAFP15056 AC073869.1-201ENST00000415574 2762 ntBASIC14.52□□□□□ -0.08
BRAFP15056 ABCD1P2-201ENST00000429313 1601 ntBASIC14.52□□□□□ -0.08
BRAFP15056 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC14.52□□□□□ -0.08
BRAFP15056 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.52□□□□□ -0.08
BRAFP15056 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
BRAFP15056 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
BRAFP15056 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
BRAFP15056 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
BRAFP15056 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC14.52□□□□□ -0.08
BRAFP15056 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
BRAFP15056 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
BRAFP15056 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
BRAFP15056 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
BRAFP15056 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
BRAFP15056 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
BRAFP15056 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
BRAFP15056 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
BRAFP15056 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
BRAFP15056 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
BRAFP15056 ALG3P1-201ENST00000508806 1114 ntBASIC14.52□□□□□ -0.09
BRAFP15056 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC14.52□□□□□ -0.09
BRAFP15056 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.52□□□□□ -0.09
BRAFP15056 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.52□□□□□ -0.09
BRAFP15056 FAM8A2P-201ENST00000528813 1142 ntBASIC14.52□□□□□ -0.09
BRAFP15056 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.52□□□□□ -0.09
BRAFP15056 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
BRAFP15056 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.52□□□□□ -0.09
BRAFP15056 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.52□□□□□ -0.09
BRAFP15056 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.52□□□□□ -0.09
BRAFP15056 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.52□□□□□ -0.09
BRAFP15056 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.52□□□□□ -0.09
BRAFP15056 AL136301.1-201ENST00000615830 422 ntBASIC14.52□□□□□ -0.09
BRAFP15056 GPR182-203ENST00000622922 591 ntBASIC14.52□□□□□ -0.09
BRAFP15056 AL008638.5-201ENST00000623814 1298 ntBASIC14.52□□□□□ -0.09
BRAFP15056 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
BRAFP15056 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.52□□□□□ -0.09
BRAFP15056 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
BRAFP15056 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
BRAFP15056 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
BRAFP15056 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
BRAFP15056 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
BRAFP15056 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
BRAFP15056 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC14.52□□□□□ -0.09
BRAFP15056 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC14.51□□□□□ -0.09
BRAFP15056 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
BRAFP15056 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
BRAFP15056 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC14.51□□□□□ -0.09
BRAFP15056 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
BRAFP15056 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms