Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
BMP4P12644 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
BMP4P12644 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
BMP4P12644 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
BMP4P12644 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
BMP4P12644 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
BMP4P12644 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC13.03□□□□□ -0.32
BMP4P12644 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
BMP4P12644 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
BMP4P12644 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
BMP4P12644 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
BMP4P12644 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
BMP4P12644 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
BMP4P12644 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
BMP4P12644 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
BMP4P12644 AL138709.1-201ENST00000614840 1693 ntBASIC13.02□□□□□ -0.32
BMP4P12644 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
BMP4P12644 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
BMP4P12644 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
BMP4P12644 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
BMP4P12644 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
BMP4P12644 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
BMP4P12644 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
BMP4P12644 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
BMP4P12644 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC13.02□□□□□ -0.32
BMP4P12644 AC022497.1-201ENST00000624916 3691 ntBASIC13.02□□□□□ -0.33
BMP4P12644 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC13.02□□□□□ -0.33
BMP4P12644 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
BMP4P12644 PI4KAP2-201ENST00000360806 2080 ntBASIC13.02□□□□□ -0.33
BMP4P12644 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
BMP4P12644 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
BMP4P12644 RNU1-114P-201ENST00000365297 166 ntBASIC13.02□□□□□ -0.33
BMP4P12644 BTBD6P1-201ENST00000412176 1267 ntBASIC13.02□□□□□ -0.33
BMP4P12644 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13.02□□□□□ -0.33
BMP4P12644 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.02□□□□□ -0.33
BMP4P12644 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC13.02□□□□□ -0.33
BMP4P12644 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.02□□□□□ -0.33
BMP4P12644 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.02□□□□□ -0.33
BMP4P12644 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.02□□□□□ -0.33
BMP4P12644 AC022494.1-201ENST00000466044 728 ntBASIC13.02□□□□□ -0.33
BMP4P12644 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.02□□□□□ -0.33
BMP4P12644 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC13.02□□□□□ -0.33
BMP4P12644 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
BMP4P12644 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.02□□□□□ -0.33
BMP4P12644 AC078819.1-201ENST00000547454 765 ntBASIC13.02□□□□□ -0.33
BMP4P12644 AC012085.1-201ENST00000548270 765 ntBASIC13.02□□□□□ -0.33
BMP4P12644 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
BMP4P12644 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC13.02□□□□□ -0.33
BMP4P12644 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.02□□□□□ -0.33
BMP4P12644 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.02□□□□□ -0.33
BMP4P12644 AC103810.3-201ENST00000583567 96 ntBASIC13.02□□□□□ -0.33
BMP4P12644 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.02□□□□□ -0.33
BMP4P12644 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.02□□□□□ -0.33
BMP4P12644 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.02□□□□□ -0.33
BMP4P12644 AGGF1P10-201ENST00000635005 2191 ntBASIC13.02□□□□□ -0.33
BMP4P12644 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC13.02□□□□□ -0.33
BMP4P12644 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC13.02□□□□□ -0.33
BMP4P12644 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.02□□□□□ -0.33
BMP4P12644 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
BMP4P12644 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
BMP4P12644 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.02□□□□□ -0.33
BMP4P12644 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
BMP4P12644 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC13.02□□□□□ -0.33
BMP4P12644 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
BMP4P12644 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC13.02□□□□□ -0.33
BMP4P12644 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
BMP4P12644 AL158070.2-201ENST00000623713 1621 ntBASIC13.02□□□□□ -0.33
BMP4P12644 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
BMP4P12644 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
BMP4P12644 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
BMP4P12644 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
BMP4P12644 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
BMP4P12644 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
BMP4P12644 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
BMP4P12644 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
BMP4P12644 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
BMP4P12644 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
BMP4P12644 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC13.01□□□□□ -0.33
BMP4P12644 INPP5J-208ENST00000412277 3512 ntTSL 2 BASIC13.01□□□□□ -0.33
BMP4P12644 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
BMP4P12644 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
BMP4P12644 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
BMP4P12644 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
BMP4P12644 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
BMP4P12644 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
BMP4P12644 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
BMP4P12644 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
BMP4P12644 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
BMP4P12644 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
BMP4P12644 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
BMP4P12644 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
BMP4P12644 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
BMP4P12644 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
BMP4P12644 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
BMP4P12644 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.01□□□□□ -0.33
BMP4P12644 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
BMP4P12644 NDUFAB1P1-201ENST00000404262 460 ntBASIC13.01□□□□□ -0.33
BMP4P12644 MIR1908-201ENST00000410394 80 ntBASIC13.01□□□□□ -0.33
BMP4P12644 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.01□□□□□ -0.33
BMP4P12644 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms