Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RB1P06400 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RB1P06400 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
RB1P06400 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RB1P06400 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
RB1P06400 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RB1P06400 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RB1P06400 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RB1P06400 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RB1P06400 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RB1P06400 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.66□□□□□ -0.06
RB1P06400 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RB1P06400 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RB1P06400 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RB1P06400 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
RB1P06400 MTHFR-210ENST00000641407 2387 ntBASIC14.66□□□□□ -0.06
RB1P06400 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.66□□□□□ -0.06
RB1P06400 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
RB1P06400 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RB1P06400 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RB1P06400 SNX15-201ENST00000352068 771 ntTSL 5 BASIC14.66□□□□□ -0.06
RB1P06400 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RB1P06400 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RB1P06400 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC14.66□□□□□ -0.06
RB1P06400 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC14.66□□□□□ -0.06
RB1P06400 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC14.66□□□□□ -0.06
RB1P06400 RN7SL578P-201ENST00000477781 283 ntBASIC14.66□□□□□ -0.06
RB1P06400 SRPK2P-201ENST00000523408 1100 ntBASIC14.66□□□□□ -0.06
RB1P06400 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC14.66□□□□□ -0.06
RB1P06400 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC14.66□□□□□ -0.06
RB1P06400 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC14.66□□□□□ -0.06
RB1P06400 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC14.66□□□□□ -0.06
RB1P06400 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC14.66□□□□□ -0.06
RB1P06400 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC14.66□□□□□ -0.06
RB1P06400 AC132812.1-201ENST00000583145 892 ntBASIC14.66□□□□□ -0.06
RB1P06400 CR392039.1-201ENST00000623217 204 ntBASIC14.66□□□□□ -0.06
RB1P06400 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RB1P06400 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
RB1P06400 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
RB1P06400 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RB1P06400 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RB1P06400 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RB1P06400 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RB1P06400 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
RB1P06400 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RB1P06400 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
RB1P06400 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RB1P06400 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.66□□□□□ -0.06
RB1P06400 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RB1P06400 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RB1P06400 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RB1P06400 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.66□□□□□ -0.06
RB1P06400 TUBB8P4-201ENST00000511806 1324 ntBASIC14.66□□□□□ -0.06
RB1P06400 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RB1P06400 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
RB1P06400 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.65□□□□□ -0.06
RB1P06400 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RB1P06400 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RB1P06400 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RB1P06400 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RB1P06400 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RB1P06400 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RB1P06400 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
RB1P06400 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.65□□□□□ -0.06
RB1P06400 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RB1P06400 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RB1P06400 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RB1P06400 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC14.65□□□□□ -0.06
RB1P06400 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RB1P06400 MIR611-201ENST00000384869 67 ntBASIC14.65□□□□□ -0.06
RB1P06400 MPV17-209ENST00000405983 859 ntTSL 5 BASIC14.65□□□□□ -0.06
RB1P06400 MED15P3-201ENST00000413613 326 ntBASIC14.65□□□□□ -0.06
RB1P06400 AHCYP3-201ENST00000420053 1279 ntBASIC14.65□□□□□ -0.06
RB1P06400 PGK1P2-201ENST00000431702 1214 ntBASIC14.65□□□□□ -0.06
RB1P06400 HNRNPA1P10-201ENST00000444945 962 ntBASIC14.65□□□□□ -0.06
RB1P06400 GYG1-209ENST00000483267 801 ntTSL 2 BASIC14.65□□□□□ -0.06
RB1P06400 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC14.65□□□□□ -0.06
RB1P06400 IGHVII-74-1-201ENST00000517572 241 ntBASIC14.65□□□□□ -0.06
RB1P06400 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RB1P06400 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC14.65□□□□□ -0.06
RB1P06400 DUT-207ENST00000559416 635 ntTSL 2 BASIC14.65□□□□□ -0.06
RB1P06400 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC14.65□□□□□ -0.06
RB1P06400 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC14.65□□□□□ -0.06
RB1P06400 KF455155.1-201ENST00000604493 303 ntBASIC14.65□□□□□ -0.06
RB1P06400 AC090510.3-201ENST00000615831 821 ntBASIC14.65□□□□□ -0.06
RB1P06400 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC14.65□□□□□ -0.06
RB1P06400 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
RB1P06400 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RB1P06400 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.65□□□□□ -0.06
RB1P06400 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
RB1P06400 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RB1P06400 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.65□□□□□ -0.06
RB1P06400 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
RB1P06400 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RB1P06400 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC14.65□□□□□ -0.06
RB1P06400 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
RB1P06400 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RB1P06400 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.65□□□□□ -0.06
RB1P06400 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC14.65□□□□□ -0.06
RB1P06400 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms