Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR3DP05423 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR3DP05423 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC16.79■□□□□ 0.28
POLR3DP05423 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR3DP05423 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC16.79■□□□□ 0.28
POLR3DP05423 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR3DP05423 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR3DP05423 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR3DP05423 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC16.79■□□□□ 0.28
POLR3DP05423 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC16.79■□□□□ 0.28
POLR3DP05423 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC16.79■□□□□ 0.28
POLR3DP05423 AP003398.1-201ENST00000531124 318 ntBASIC16.79■□□□□ 0.28
POLR3DP05423 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC16.79■□□□□ 0.28
POLR3DP05423 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
POLR3DP05423 RN7SL470P-201ENST00000583069 259 ntBASIC16.79■□□□□ 0.28
POLR3DP05423 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC16.79■□□□□ 0.28
POLR3DP05423 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC16.79■□□□□ 0.28
POLR3DP05423 AC073911.3-201ENST00000624401 631 ntBASIC16.79■□□□□ 0.28
POLR3DP05423 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC16.79■□□□□ 0.28
POLR3DP05423 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR3DP05423 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR3DP05423 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC16.79■□□□□ 0.28
POLR3DP05423 DDC-213ENST00000617822 1809 ntTSL 3 BASIC16.79■□□□□ 0.28
POLR3DP05423 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
POLR3DP05423 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
POLR3DP05423 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC16.79■□□□□ 0.28
POLR3DP05423 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
POLR3DP05423 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR3DP05423 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR3DP05423 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR3DP05423 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC16.79■□□□□ 0.28
POLR3DP05423 AC090643.2-201ENST00000623442 2029 ntBASIC16.79■□□□□ 0.28
POLR3DP05423 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR3DP05423 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
POLR3DP05423 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC16.79■□□□□ 0.28
POLR3DP05423 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC16.79■□□□□ 0.28
POLR3DP05423 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC16.79■□□□□ 0.28
POLR3DP05423 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC16.78■□□□□ 0.28
POLR3DP05423 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
POLR3DP05423 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR3DP05423 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC16.78■□□□□ 0.28
POLR3DP05423 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR3DP05423 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
POLR3DP05423 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
POLR3DP05423 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
POLR3DP05423 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC16.78■□□□□ 0.28
POLR3DP05423 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR3DP05423 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR3DP05423 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
POLR3DP05423 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC16.78■□□□□ 0.28
POLR3DP05423 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC16.78■□□□□ 0.28
POLR3DP05423 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR3DP05423 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
POLR3DP05423 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR3DP05423 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
POLR3DP05423 PPP1R2P4-201ENST00000424051 595 ntBASIC16.78■□□□□ 0.28
POLR3DP05423 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
POLR3DP05423 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
POLR3DP05423 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
POLR3DP05423 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
POLR3DP05423 AP000911.2-201ENST00000534330 502 ntBASIC16.78■□□□□ 0.28
POLR3DP05423 CR383656.3-201ENST00000551315 183 ntBASIC16.78■□□□□ 0.28
POLR3DP05423 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC16.78■□□□□ 0.28
POLR3DP05423 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC16.78■□□□□ 0.28
POLR3DP05423 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC16.78■□□□□ 0.28
POLR3DP05423 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC16.78■□□□□ 0.28
POLR3DP05423 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC16.78■□□□□ 0.28
POLR3DP05423 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR3DP05423 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC16.78■□□□□ 0.28
POLR3DP05423 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR3DP05423 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC16.78■□□□□ 0.28
POLR3DP05423 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
POLR3DP05423 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR3DP05423 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR3DP05423 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
POLR3DP05423 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
POLR3DP05423 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
POLR3DP05423 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR3DP05423 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR3DP05423 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR3DP05423 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC16.78■□□□□ 0.28
POLR3DP05423 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC16.78■□□□□ 0.28
POLR3DP05423 KRT8P18-201ENST00000413425 1445 ntBASIC16.78■□□□□ 0.28
POLR3DP05423 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
POLR3DP05423 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
POLR3DP05423 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
POLR3DP05423 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC16.77■□□□□ 0.28
POLR3DP05423 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
POLR3DP05423 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC16.77■□□□□ 0.28
POLR3DP05423 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
POLR3DP05423 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
POLR3DP05423 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
POLR3DP05423 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC16.77■□□□□ 0.28
POLR3DP05423 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
POLR3DP05423 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
POLR3DP05423 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
POLR3DP05423 MAPT-IT1-201ENST00000624111 3016 ntBASIC16.77■□□□□ 0.28
POLR3DP05423 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC16.77■□□□□ 0.28
POLR3DP05423 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
POLR3DP05423 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms