Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CD74P04233 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC11.82□□□□□ -0.52
CD74P04233 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CD74P04233 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CD74P04233 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
CD74P04233 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
CD74P04233 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC11.82□□□□□ -0.52
CD74P04233 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
CD74P04233 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC11.82□□□□□ -0.52
CD74P04233 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
CD74P04233 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
CD74P04233 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CD74P04233 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CD74P04233 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CD74P04233 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
CD74P04233 GRAP-202ENST00000395635 834 ntTSL 2 BASIC11.82□□□□□ -0.52
CD74P04233 LBH-203ENST00000404397 543 ntTSL 4 BASIC11.82□□□□□ -0.52
CD74P04233 AL157407.1-201ENST00000435784 904 ntBASIC11.82□□□□□ -0.52
CD74P04233 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC11.82□□□□□ -0.52
CD74P04233 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC11.82□□□□□ -0.52
CD74P04233 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC11.82□□□□□ -0.52
CD74P04233 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
CD74P04233 AC140658.4-201ENST00000561990 352 ntBASIC11.82□□□□□ -0.52
CD74P04233 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC11.82□□□□□ -0.52
CD74P04233 AC027796.2-201ENST00000575326 344 ntBASIC11.82□□□□□ -0.52
CD74P04233 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
CD74P04233 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC11.82□□□□□ -0.52
CD74P04233 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC11.82□□□□□ -0.52
CD74P04233 ECM1P1-201ENST00000604092 1279 ntBASIC11.82□□□□□ -0.52
CD74P04233 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC11.82□□□□□ -0.52
CD74P04233 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC11.82□□□□□ -0.52
CD74P04233 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC11.82□□□□□ -0.52
CD74P04233 PER1-202ENST00000354903 3115 ntTSL 2 BASIC11.82□□□□□ -0.52
CD74P04233 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
CD74P04233 ACER1-201ENST00000301452 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CD74P04233 ZNF771-204ENST00000566625 2415 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CD74P04233 AL139158.3-201ENST00000641212 1562 ntBASIC11.82□□□□□ -0.52
CD74P04233 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
CD74P04233 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
CD74P04233 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CD74P04233 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CD74P04233 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
CD74P04233 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
CD74P04233 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC11.82□□□□□ -0.52
CD74P04233 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CD74P04233 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CD74P04233 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CD74P04233 KRT18P28-201ENST00000453838 1332 ntBASIC11.82□□□□□ -0.52
CD74P04233 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CD74P04233 RPL13AP3-202ENST00000494676 1473 ntBASIC11.82□□□□□ -0.52
CD74P04233 NUSAP1-208ENST00000559596 1629 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
CD74P04233 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
CD74P04233 CYP24A1-203ENST00000395955 2227 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CD74P04233 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
CD74P04233 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
CD74P04233 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CD74P04233 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
CD74P04233 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CD74P04233 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
CD74P04233 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CD74P04233 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CD74P04233 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
CD74P04233 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
CD74P04233 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CD74P04233 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CD74P04233 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CD74P04233 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CD74P04233 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CD74P04233 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CD74P04233 GLO1-201ENST00000373365 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CD74P04233 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
CD74P04233 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CD74P04233 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
CD74P04233 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
CD74P04233 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CD74P04233 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
CD74P04233 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CD74P04233 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CD74P04233 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CD74P04233 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CD74P04233 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
CD74P04233 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CD74P04233 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
CD74P04233 GUK1-206ENST00000366723 845 ntTSL 5 BASIC11.81□□□□□ -0.52
CD74P04233 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CD74P04233 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CD74P04233 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
CD74P04233 PARVG-202ENST00000415224 999 ntTSL 2 BASIC11.81□□□□□ -0.52
CD74P04233 HNRNPA1P2-207ENST00000432375 960 ntBASIC11.81□□□□□ -0.52
CD74P04233 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CD74P04233 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CD74P04233 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC11.81□□□□□ -0.52
CD74P04233 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC11.81□□□□□ -0.52
CD74P04233 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC11.81□□□□□ -0.52
CD74P04233 RBM8B-201ENST00000555532 525 ntBASIC11.81□□□□□ -0.52
CD74P04233 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC11.81□□□□□ -0.52
CD74P04233 AL356740.1-201ENST00000602192 1297 ntBASIC11.81□□□□□ -0.52
CD74P04233 AL355385.1-201ENST00000606123 409 ntBASIC11.81□□□□□ -0.52
CD74P04233 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
CD74P04233 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms