Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 KRT18P31-201ENST00000506277 1292 ntBASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 AC026369.2-201ENST00000540136 1101 ntTSL 3 BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 RPS15-202ENST00000585665 467 ntTSL 3 BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 AL078644.1-201ENST00000609881 752 ntBASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 AC124864.1-201ENST00000623408 392 ntBASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 CEP83-203ENST00000397809 3773 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 MMP2-202ENST00000437642 2469 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 AKAP1-219ENST00000621116 4285 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 POFUT2-213ENST00000612472 2959 ntTSL 5 BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 PLEC-204ENST00000354958 14751 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 SLC12A8-202ENST00000430155 2831 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 TLR5-201ENST00000366881 3368 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 CCDC88A-207ENST00000436346 9811 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 IL36RN-202ENST00000393200 2700 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 CPSF3-202ENST00000460593 3157 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 ERCC1-204ENST00000423698 3119 ntTSL 2 BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 SHANK2-201ENST00000338508 7271 ntTSL 5 BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 STAT5A-209ENST00000588868 3629 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 AC093525.6-201ENST00000563449 2001 ntBASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 AC012313.5-201ENST00000594816 2517 ntBASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 AC006372.3-201ENST00000444158 4049 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 SCN3B-206ENST00000530277 3984 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 CICP3-201ENST00000440782 2455 ntBASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 ZNF589-201ENST00000354698 3368 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 INTS4P1-201ENST00000438455 1935 ntBASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 TBX19-201ENST00000367821 2822 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 CHID1-205ENST00000454838 3255 ntTSL 5 BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 CIITA-202ENST00000381835 2344 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 DUSP27-202ENST00000361200 4164 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 POLR3H-203ENST00000396504 4176 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 ARL4A-203ENST00000396663 3212 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 TAF1C-201ENST00000341690 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 CHRNB1-208ENST00000576360 1837 ntTSL 3 BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 LRTOMT-207ENST00000435085 3194 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 AGAP1-212ENST00000614409 9932 ntTSL 5 BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 UBOX5-202ENST00000348031 4469 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 CEP83-201ENST00000339839 3130 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 SPATA13-202ENST00000382095 6665 ntAPPRIS P3 TSL 2 BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 KLHDC4-205ENST00000446344 4444 ntBASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 ITGA10-201ENST00000369304 5269 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 USP5-202ENST00000389231 3083 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 CNGB1-204ENST00000564448 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 TDRD3-201ENST00000196169 3019 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 PTK2B-203ENST00000397501 4719 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 ZNF749-201ENST00000334181 2587 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 RPS2P55-201ENST00000397318 883 ntBASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 SLC29A4P1-201ENST00000398760 971 ntBASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 LMCD1-AS1-201ENST00000420095 2144 ntTSL 2 BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 AL845331.1-201ENST00000424978 1190 ntBASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 AC034268.1-201ENST00000441047 882 ntBASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 NME4-207ENST00000450036 985 ntTSL 3 BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 FAM87A-204ENST00000613235 858 ntBASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 ZNF488-202ENST00000591025 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 MYT1-202ENST00000360149 2061 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 TMCC2-203ENST00000358024 3738 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
LINC01558Q9Y6Z2 ANKRD13A-201ENST00000261739 4148 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms