Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPASTQ9UBP0 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
SPASTQ9UBP0 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.07□□□□□ -0.16
SPASTQ9UBP0 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
SPASTQ9UBP0 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
SPASTQ9UBP0 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPASTQ9UBP0 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPASTQ9UBP0 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SPASTQ9UBP0 Z69890.1-201ENST00000382990 339 ntBASIC14.07□□□□□ -0.16
SPASTQ9UBP0 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC14.07□□□□□ -0.16
SPASTQ9UBP0 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC14.07□□□□□ -0.16
SPASTQ9UBP0 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC14.07□□□□□ -0.16
SPASTQ9UBP0 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC14.07□□□□□ -0.16
SPASTQ9UBP0 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SPASTQ9UBP0 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC14.07□□□□□ -0.16
SPASTQ9UBP0 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC14.07□□□□□ -0.16
SPASTQ9UBP0 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SPASTQ9UBP0 POLD4-208ENST00000532830 904 ntTSL 3 BASIC14.07□□□□□ -0.16
SPASTQ9UBP0 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC14.07□□□□□ -0.16
SPASTQ9UBP0 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC14.07□□□□□ -0.16
SPASTQ9UBP0 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC14.07□□□□□ -0.16
SPASTQ9UBP0 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC14.07□□□□□ -0.16
SPASTQ9UBP0 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC14.07□□□□□ -0.16
SPASTQ9UBP0 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC14.07□□□□□ -0.16
SPASTQ9UBP0 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
SPASTQ9UBP0 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPASTQ9UBP0 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SPASTQ9UBP0 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPASTQ9UBP0 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.07□□□□□ -0.16
SPASTQ9UBP0 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.07□□□□□ -0.16
SPASTQ9UBP0 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.07□□□□□ -0.16
SPASTQ9UBP0 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPASTQ9UBP0 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.07□□□□□ -0.16
SPASTQ9UBP0 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SPASTQ9UBP0 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SPASTQ9UBP0 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPASTQ9UBP0 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC14.07□□□□□ -0.16
SPASTQ9UBP0 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SPASTQ9UBP0 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SPASTQ9UBP0 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPASTQ9UBP0 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPASTQ9UBP0 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPASTQ9UBP0 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC14.07□□□□□ -0.16
SPASTQ9UBP0 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPASTQ9UBP0 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 AL161932.2-201ENST00000435436 679 ntBASIC14.06□□□□□ -0.16
SPASTQ9UBP0 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 ORAOV1P1-201ENST00000503108 395 ntBASIC14.06□□□□□ -0.16
SPASTQ9UBP0 ALG1L13P-202ENST00000519320 584 ntBASIC14.06□□□□□ -0.16
SPASTQ9UBP0 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 AC138701.2-201ENST00000553634 226 ntBASIC14.06□□□□□ -0.16
SPASTQ9UBP0 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 MIR6074-201ENST00000612054 107 ntBASIC14.06□□□□□ -0.16
SPASTQ9UBP0 MIR6842-201ENST00000612539 65 ntBASIC14.06□□□□□ -0.16
SPASTQ9UBP0 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 TEKT4P2-202ENST00000559466 1312 ntBASIC14.06□□□□□ -0.16
SPASTQ9UBP0 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms