Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 AL157407.1-201ENST00000435784 904 ntBASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 C2orf69P2-201ENST00000562032 1123 ntBASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 CR392039.2-201ENST00000623182 509 ntBASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 AC107375.1-201ENST00000564464 2231 ntBASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 USP39-220ENST00000613444 2161 ntTSL 2 BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 AL021155.1-201ENST00000438808 2637 ntBASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
AMBRA1Q9C0C7 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC13.21□□□□□ -0.29
AMBRA1Q9C0C7 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC13.21□□□□□ -0.29
AMBRA1Q9C0C7 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
AMBRA1Q9C0C7 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
AMBRA1Q9C0C7 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
AMBRA1Q9C0C7 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
AMBRA1Q9C0C7 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC13.21□□□□□ -0.29
AMBRA1Q9C0C7 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
AMBRA1Q9C0C7 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC13.21□□□□□ -0.29
AMBRA1Q9C0C7 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
AMBRA1Q9C0C7 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
AMBRA1Q9C0C7 TUBB4AP1-201ENST00000450755 1325 ntBASIC13.21□□□□□ -0.29
AMBRA1Q9C0C7 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC13.21□□□□□ -0.29
AMBRA1Q9C0C7 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
AMBRA1Q9C0C7 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
AMBRA1Q9C0C7 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
AMBRA1Q9C0C7 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
AMBRA1Q9C0C7 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC13.21□□□□□ -0.29
AMBRA1Q9C0C7 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
AMBRA1Q9C0C7 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.21□□□□□ -0.29
AMBRA1Q9C0C7 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
AMBRA1Q9C0C7 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
AMBRA1Q9C0C7 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
AMBRA1Q9C0C7 BRWD1P1-201ENST00000401091 371 ntBASIC13.21□□□□□ -0.29
AMBRA1Q9C0C7 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.21□□□□□ -0.29
AMBRA1Q9C0C7 AL355994.2-201ENST00000447882 704 ntBASIC13.21□□□□□ -0.29
AMBRA1Q9C0C7 BNIP3P42-201ENST00000454982 569 ntBASIC13.21□□□□□ -0.29
AMBRA1Q9C0C7 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
AMBRA1Q9C0C7 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.21□□□□□ -0.29
AMBRA1Q9C0C7 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.21□□□□□ -0.29
AMBRA1Q9C0C7 AL512310.5-201ENST00000551999 515 ntBASIC13.21□□□□□ -0.29
AMBRA1Q9C0C7 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
AMBRA1Q9C0C7 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC13.21□□□□□ -0.29
AMBRA1Q9C0C7 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC13.21□□□□□ -0.29
AMBRA1Q9C0C7 PPY2P-201ENST00000582808 702 ntBASIC13.21□□□□□ -0.29
AMBRA1Q9C0C7 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
AMBRA1Q9C0C7 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.21□□□□□ -0.29
AMBRA1Q9C0C7 BNIP3P29-201ENST00000598302 571 ntBASIC13.21□□□□□ -0.29
AMBRA1Q9C0C7 AC011447.5-201ENST00000616168 564 ntBASIC13.21□□□□□ -0.29
AMBRA1Q9C0C7 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
AMBRA1Q9C0C7 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
AMBRA1Q9C0C7 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
AMBRA1Q9C0C7 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
AMBRA1Q9C0C7 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
AMBRA1Q9C0C7 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.3
AMBRA1Q9C0C7 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
AMBRA1Q9C0C7 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
AMBRA1Q9C0C7 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
AMBRA1Q9C0C7 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
AMBRA1Q9C0C7 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
AMBRA1Q9C0C7 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
AMBRA1Q9C0C7 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
AMBRA1Q9C0C7 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
AMBRA1Q9C0C7 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
AMBRA1Q9C0C7 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
AMBRA1Q9C0C7 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms