Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NICN1Q9BSH3 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NICN1Q9BSH3 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NICN1Q9BSH3 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
NICN1Q9BSH3 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NICN1Q9BSH3 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NICN1Q9BSH3 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC12.12□□□□□ -0.47
NICN1Q9BSH3 HMGA1P1-201ENST00000415560 1062 ntBASIC12.12□□□□□ -0.47
NICN1Q9BSH3 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC12.12□□□□□ -0.47
NICN1Q9BSH3 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NICN1Q9BSH3 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC12.12□□□□□ -0.47
NICN1Q9BSH3 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC12.12□□□□□ -0.47
NICN1Q9BSH3 KRT18P15-201ENST00000458108 1291 ntBASIC12.12□□□□□ -0.47
NICN1Q9BSH3 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NICN1Q9BSH3 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
NICN1Q9BSH3 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NICN1Q9BSH3 RBM8B-201ENST00000555532 525 ntBASIC12.12□□□□□ -0.47
NICN1Q9BSH3 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC12.12□□□□□ -0.47
NICN1Q9BSH3 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC12.12□□□□□ -0.47
NICN1Q9BSH3 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC12.12□□□□□ -0.47
NICN1Q9BSH3 PPY2P-201ENST00000582808 702 ntBASIC12.12□□□□□ -0.47
NICN1Q9BSH3 DRG2-220ENST00000583355 891 ntTSL 3 BASIC12.12□□□□□ -0.47
NICN1Q9BSH3 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NICN1Q9BSH3 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC12.12□□□□□ -0.47
NICN1Q9BSH3 MIR6720-201ENST00000611664 98 ntBASIC12.12□□□□□ -0.47
NICN1Q9BSH3 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NICN1Q9BSH3 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC12.12□□□□□ -0.47
NICN1Q9BSH3 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.12□□□□□ -0.47
NICN1Q9BSH3 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NICN1Q9BSH3 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NICN1Q9BSH3 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NICN1Q9BSH3 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC12.12□□□□□ -0.47
NICN1Q9BSH3 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.12□□□□□ -0.47
NICN1Q9BSH3 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
NICN1Q9BSH3 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC12.12□□□□□ -0.47
NICN1Q9BSH3 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NICN1Q9BSH3 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NICN1Q9BSH3 AC115284.2-201ENST00000624646 2054 ntBASIC12.12□□□□□ -0.47
NICN1Q9BSH3 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NICN1Q9BSH3 AP003969.2-201ENST00000623739 2275 ntBASIC12.12□□□□□ -0.47
NICN1Q9BSH3 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC12.12□□□□□ -0.47
NICN1Q9BSH3 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
NICN1Q9BSH3 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NICN1Q9BSH3 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NICN1Q9BSH3 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NICN1Q9BSH3 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 AC007952.5-201ENST00000572818 1486 ntBASIC12.11□□□□□ -0.47
NICN1Q9BSH3 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 RBM38-204ENST00000371219 760 ntTSL 2 BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 AK6-201ENST00000380818 1183 ntTSL 2 BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 MIR1202-201ENST00000408529 83 ntBASIC12.11□□□□□ -0.47
NICN1Q9BSH3 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 AC112492.5-201ENST00000421897 457 ntBASIC12.11□□□□□ -0.47
NICN1Q9BSH3 AC016694.1-201ENST00000434179 700 ntBASIC12.11□□□□□ -0.47
NICN1Q9BSH3 AL355994.2-201ENST00000447882 704 ntBASIC12.11□□□□□ -0.47
NICN1Q9BSH3 AC007389.4-201ENST00000454674 793 ntBASIC12.11□□□□□ -0.47
NICN1Q9BSH3 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 RPL8-205ENST00000527914 551 ntTSL 3 BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 KRT90P-201ENST00000549264 1064 ntBASIC12.11□□□□□ -0.47
NICN1Q9BSH3 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 AC027796.2-201ENST00000575326 344 ntBASIC12.11□□□□□ -0.47
NICN1Q9BSH3 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 AL096865.1-201ENST00000606796 927 ntBASIC12.11□□□□□ -0.47
NICN1Q9BSH3 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC12.11□□□□□ -0.47
NICN1Q9BSH3 LARP4-220ENST00000615080 856 ntTSL 5 BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 PCDHB19P-202ENST00000625133 2914 ntBASIC12.11□□□□□ -0.47
NICN1Q9BSH3 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms