Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
VRK1Q99986 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VRK1Q99986 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
VRK1Q99986 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
VRK1Q99986 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VRK1Q99986 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VRK1Q99986 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
VRK1Q99986 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
VRK1Q99986 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
VRK1Q99986 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VRK1Q99986 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
VRK1Q99986 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VRK1Q99986 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
VRK1Q99986 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC12.56□□□□□ -0.4
VRK1Q99986 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
VRK1Q99986 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
VRK1Q99986 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.56□□□□□ -0.4
VRK1Q99986 TUBBP5-203ENST00000508529 1334 ntBASIC12.56□□□□□ -0.4
VRK1Q99986 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
VRK1Q99986 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VRK1Q99986 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC12.56□□□□□ -0.4
VRK1Q99986 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
VRK1Q99986 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
VRK1Q99986 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VRK1Q99986 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
VRK1Q99986 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
VRK1Q99986 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
VRK1Q99986 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.56□□□□□ -0.4
VRK1Q99986 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VRK1Q99986 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VRK1Q99986 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.56□□□□□ -0.4
VRK1Q99986 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
VRK1Q99986 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VRK1Q99986 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
VRK1Q99986 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VRK1Q99986 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
VRK1Q99986 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
VRK1Q99986 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
VRK1Q99986 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.55□□□□□ -0.4
VRK1Q99986 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
VRK1Q99986 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC12.55□□□□□ -0.4
VRK1Q99986 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC12.55□□□□□ -0.4
VRK1Q99986 AGGF1P1-201ENST00000509500 2073 ntBASIC12.55□□□□□ -0.4
VRK1Q99986 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
VRK1Q99986 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.55□□□□□ -0.4
VRK1Q99986 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
VRK1Q99986 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
VRK1Q99986 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC12.55□□□□□ -0.4
VRK1Q99986 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
VRK1Q99986 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VRK1Q99986 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
VRK1Q99986 CICP16-201ENST00000502609 2813 ntBASIC12.55□□□□□ -0.4
VRK1Q99986 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VRK1Q99986 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VRK1Q99986 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VRK1Q99986 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
VRK1Q99986 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
VRK1Q99986 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
VRK1Q99986 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.55□□□□□ -0.4
VRK1Q99986 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VRK1Q99986 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC12.55□□□□□ -0.4
VRK1Q99986 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VRK1Q99986 SDCCAG3P2-201ENST00000326105 1023 ntBASIC12.55□□□□□ -0.4
VRK1Q99986 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC12.55□□□□□ -0.4
VRK1Q99986 NPPA-201ENST00000376476 728 ntTSL 3 BASIC12.55□□□□□ -0.4
VRK1Q99986 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
VRK1Q99986 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC12.55□□□□□ -0.4
VRK1Q99986 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC12.55□□□□□ -0.4
VRK1Q99986 PUDPP3-201ENST00000445368 636 ntBASIC12.55□□□□□ -0.4
VRK1Q99986 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC12.55□□□□□ -0.4
VRK1Q99986 CICP12-201ENST00000455801 843 ntBASIC12.55□□□□□ -0.4
VRK1Q99986 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC12.55□□□□□ -0.4
VRK1Q99986 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
VRK1Q99986 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC12.55□□□□□ -0.4
VRK1Q99986 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
VRK1Q99986 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC12.55□□□□□ -0.4
VRK1Q99986 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC12.55□□□□□ -0.4
VRK1Q99986 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
VRK1Q99986 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.55□□□□□ -0.4
VRK1Q99986 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
VRK1Q99986 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
VRK1Q99986 MIR4783-201ENST00000580343 82 ntBASIC12.55□□□□□ -0.4
VRK1Q99986 AC005962.1-201ENST00000584100 773 ntBASIC12.55□□□□□ -0.4
VRK1Q99986 AC005324.6-201ENST00000587972 613 ntBASIC12.55□□□□□ -0.4
VRK1Q99986 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC12.55□□□□□ -0.4
VRK1Q99986 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VRK1Q99986 MIR6720-201ENST00000611664 98 ntBASIC12.55□□□□□ -0.4
VRK1Q99986 AC100757.4-201ENST00000626934 759 ntBASIC12.55□□□□□ -0.4
VRK1Q99986 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC12.55□□□□□ -0.4
VRK1Q99986 AC068587.8-201ENST00000641239 219 ntBASIC12.55□□□□□ -0.4
VRK1Q99986 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
VRK1Q99986 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
VRK1Q99986 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VRK1Q99986 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.55□□□□□ -0.4
VRK1Q99986 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
VRK1Q99986 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
VRK1Q99986 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
VRK1Q99986 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VRK1Q99986 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC12.55□□□□□ -0.4
VRK1Q99986 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms