Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 GNPDA1-210ENST00000508177 2980 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 HDLBP-203ENST00000391975 6372 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 WDR92-201ENST00000295121 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 RETREG3-201ENST00000309428 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 XIRP1-202ENST00000396251 6040 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 TOLLIP-207ENST00000527886 3666 ntTSL 2 BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 AL357140.3-201ENST00000639753 1983 ntBASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 NFE2L1-203ENST00000362042 4774 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 COX7A2L-202ENST00000378669 3056 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 AQP2-201ENST00000199280 4174 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 ALS2CL-201ENST00000318962 4741 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 ANAPC7-203ENST00000455511 3045 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 EFHD1-203ENST00000409708 1817 ntTSL 2 BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 ZNF473-203ENST00000445728 2833 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 PCDHB4-201ENST00000194152 3825 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 RPL30-202ENST00000396070 440 ntTSL 2 BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 SPDYE17-201ENST00000412399 783 ntBASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 AL627223.1-201ENST00000416693 442 ntBASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 AC254562.1-201ENST00000417586 456 ntBASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 SSH2-211ENST00000590153 570 ntTSL 4 BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 AC084121.4-201ENST00000641598 221 ntBASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 AF228730.8-201ENST00000642140 221 ntBASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 FAM131B-204ENST00000409578 4286 ntTSL 5 BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 KCNK10-202ENST00000319231 2725 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 BCL2L11-223ENST00000622612 4995 ntTSL 5 BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 SPHK2-208ENST00000599029 3085 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 KLHL24-211ENST00000476808 2126 ntTSL 2 BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 LRTM2-208ENST00000543818 3986 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 GOLGA3-202ENST00000450791 8870 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 S1PR1-201ENST00000305352 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 ELN-204ENST00000357036 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 OFD1-203ENST00000380567 3736 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 GOLGA6L4-203ENST00000510439 4563 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 SLC26A4-201ENST00000265715 4930 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 HSPA8P9-201ENST00000485881 1943 ntBASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
KCNIP4Q6PIL6 CAPN10-AS1-201ENST00000567819 4000 ntBASIC10.93□□□□□ -0.66
KCNIP4Q6PIL6 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
KCNIP4Q6PIL6 VWDE-201ENST00000275358 5260 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
KCNIP4Q6PIL6 MED24-204ENST00000394128 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
KCNIP4Q6PIL6 PIWIL1-201ENST00000245255 3897 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
KCNIP4Q6PIL6 RTEL1-211ENST00000508582 4273 ntTSL 2 BASIC10.93□□□□□ -0.66
KCNIP4Q6PIL6 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC10.93□□□□□ -0.66
KCNIP4Q6PIL6 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
KCNIP4Q6PIL6 POPDC2-208ENST00000493094 1837 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
KCNIP4Q6PIL6 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC10.93□□□□□ -0.66
KCNIP4Q6PIL6 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC10.93□□□□□ -0.66
KCNIP4Q6PIL6 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
KCNIP4Q6PIL6 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
KCNIP4Q6PIL6 KMT2A-201ENST00000389506 13655 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
KCNIP4Q6PIL6 DLGAP2-201ENST00000421627 3165 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
KCNIP4Q6PIL6 CAST-223ENST00000508608 2425 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
KCNIP4Q6PIL6 RBM20-201ENST00000369519 7233 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
KCNIP4Q6PIL6 AC092139.4-201ENST00000624318 2794 ntBASIC10.93□□□□□ -0.66
KCNIP4Q6PIL6 PHC2-201ENST00000257118 3870 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
KCNIP4Q6PIL6 PNMA5-204ENST00000452693 3113 ntAPPRIS P2 TSL 2 BASIC10.93□□□□□ -0.66
KCNIP4Q6PIL6 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
KCNIP4Q6PIL6 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
KCNIP4Q6PIL6 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
KCNIP4Q6PIL6 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
KCNIP4Q6PIL6 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
KCNIP4Q6PIL6 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
KCNIP4Q6PIL6 HNRNPFP1-201ENST00000391730 1133 ntBASIC10.93□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms