Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AC023824.1-201ENST00000562945 2975 ntBASIC13.62□□□□□ -0.23
LYSMD4Q5XG99 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC13.62□□□□□ -0.23
LYSMD4Q5XG99 NEK4P3-201ENST00000604859 544 ntBASIC13.62□□□□□ -0.23
LYSMD4Q5XG99 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC13.62□□□□□ -0.23
LYSMD4Q5XG99 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD4Q5XG99 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD4Q5XG99 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD4Q5XG99 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD4Q5XG99 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD4Q5XG99 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.62□□□□□ -0.23
LYSMD4Q5XG99 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
LYSMD4Q5XG99 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD4Q5XG99 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
LYSMD4Q5XG99 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD4Q5XG99 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD4Q5XG99 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.61□□□□□ -0.23
LYSMD4Q5XG99 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.61□□□□□ -0.23
LYSMD4Q5XG99 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
LYSMD4Q5XG99 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD4Q5XG99 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD4Q5XG99 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
LYSMD4Q5XG99 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.61□□□□□ -0.23
LYSMD4Q5XG99 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD4Q5XG99 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
LYSMD4Q5XG99 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
LYSMD4Q5XG99 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD4Q5XG99 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC13.61□□□□□ -0.23
LYSMD4Q5XG99 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD4Q5XG99 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD4Q5XG99 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC13.61□□□□□ -0.23
LYSMD4Q5XG99 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD4Q5XG99 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD4Q5XG99 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD4Q5XG99 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD4Q5XG99 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD4Q5XG99 AC004522.1-201ENST00000419978 654 ntBASIC13.61□□□□□ -0.23
LYSMD4Q5XG99 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC13.61□□□□□ -0.23
LYSMD4Q5XG99 HNRNPA1P42-201ENST00000458678 957 ntBASIC13.61□□□□□ -0.23
LYSMD4Q5XG99 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC13.61□□□□□ -0.23
LYSMD4Q5XG99 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC13.61□□□□□ -0.23
LYSMD4Q5XG99 ANKRD26P1-203ENST00000569528 966 ntBASIC13.61□□□□□ -0.23
LYSMD4Q5XG99 KRT8P34-201ENST00000577607 1044 ntBASIC13.61□□□□□ -0.23
LYSMD4Q5XG99 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC13.61□□□□□ -0.23
LYSMD4Q5XG99 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC13.61□□□□□ -0.23
LYSMD4Q5XG99 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC13.61□□□□□ -0.23
LYSMD4Q5XG99 AC010531.8-201ENST00000623341 685 ntBASIC13.61□□□□□ -0.23
LYSMD4Q5XG99 BX322534.1-201ENST00000635574 241 ntBASIC13.61□□□□□ -0.23
LYSMD4Q5XG99 AC215524.1-201ENST00000635696 241 ntBASIC13.61□□□□□ -0.23
LYSMD4Q5XG99 AC110057.1-201ENST00000636031 898 ntBASIC13.61□□□□□ -0.23
LYSMD4Q5XG99 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD4Q5XG99 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD4Q5XG99 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD4Q5XG99 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC13.61□□□□□ -0.23
LYSMD4Q5XG99 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD4Q5XG99 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD4Q5XG99 FAM226B-201ENST00000602508 1490 ntBASIC13.61□□□□□ -0.23
LYSMD4Q5XG99 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
LYSMD4Q5XG99 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
LYSMD4Q5XG99 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.6□□□□□ -0.23
LYSMD4Q5XG99 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD4Q5XG99 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
LYSMD4Q5XG99 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD4Q5XG99 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD4Q5XG99 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD4Q5XG99 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD4Q5XG99 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD4Q5XG99 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD4Q5XG99 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD4Q5XG99 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD4Q5XG99 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD4Q5XG99 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
LYSMD4Q5XG99 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
LYSMD4Q5XG99 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.6□□□□□ -0.23
LYSMD4Q5XG99 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD4Q5XG99 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD4Q5XG99 AC010086.2-201ENST00000428616 226 ntBASIC13.6□□□□□ -0.23
LYSMD4Q5XG99 AL773545.2-201ENST00000442149 472 ntBASIC13.6□□□□□ -0.23
LYSMD4Q5XG99 AP000533.1-201ENST00000456143 1177 ntBASIC13.6□□□□□ -0.23
LYSMD4Q5XG99 HNRNPA3P6-201ENST00000472163 1006 ntBASIC13.6□□□□□ -0.23
LYSMD4Q5XG99 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
LYSMD4Q5XG99 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC13.6□□□□□ -0.23
LYSMD4Q5XG99 AC004923.3-201ENST00000527532 355 ntBASIC13.6□□□□□ -0.23
LYSMD4Q5XG99 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC13.6□□□□□ -0.23
LYSMD4Q5XG99 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC13.6□□□□□ -0.23
LYSMD4Q5XG99 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC13.6□□□□□ -0.23
LYSMD4Q5XG99 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD4Q5XG99 AC016582.2-202ENST00000587765 1094 ntBASIC13.6□□□□□ -0.23
LYSMD4Q5XG99 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD4Q5XG99 AL591424.3-201ENST00000614278 872 ntBASIC13.6□□□□□ -0.23
LYSMD4Q5XG99 AC026120.2-201ENST00000617239 309 ntBASIC13.6□□□□□ -0.23
LYSMD4Q5XG99 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
LYSMD4Q5XG99 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC13.6□□□□□ -0.23
LYSMD4Q5XG99 AL357143.1-203ENST00000639750 881 ntBASIC13.6□□□□□ -0.23
LYSMD4Q5XG99 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.6□□□□□ -0.23
LYSMD4Q5XG99 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
LYSMD4Q5XG99 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD4Q5XG99 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
LYSMD4Q5XG99 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.6□□□□□ -0.23
LYSMD4Q5XG99 AC113367.3-201ENST00000508316 1912 ntBASIC13.6□□□□□ -0.23
LYSMD4Q5XG99 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms