Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.96□□□□□ -0.01
VARS2Q5ST30 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC14.96□□□□□ -0.01
VARS2Q5ST30 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC14.96□□□□□ -0.01
VARS2Q5ST30 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC14.96□□□□□ -0.01
VARS2Q5ST30 AC138761.6-201ENST00000583997 1423 ntBASIC14.96□□□□□ -0.01
VARS2Q5ST30 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VARS2Q5ST30 SNHG5-213ENST00000622963 753 ntTSL 5 BASIC14.96□□□□□ -0.01
VARS2Q5ST30 AC002044.2-201ENST00000624910 970 ntBASIC14.96□□□□□ -0.01
VARS2Q5ST30 OR5P3-202ENST00000641167 1193 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
VARS2Q5ST30 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
VARS2Q5ST30 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VARS2Q5ST30 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
VARS2Q5ST30 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
VARS2Q5ST30 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
VARS2Q5ST30 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
VARS2Q5ST30 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.96□□□□□ -0.01
VARS2Q5ST30 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
VARS2Q5ST30 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC14.96□□□□□ -0.02
VARS2Q5ST30 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.96□□□□□ -0.02
VARS2Q5ST30 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC14.96□□□□□ -0.02
VARS2Q5ST30 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC14.96□□□□□ -0.02
VARS2Q5ST30 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
VARS2Q5ST30 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC14.96□□□□□ -0.02
VARS2Q5ST30 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
VARS2Q5ST30 BX640514.1-201ENST00000583223 1918 ntBASIC14.96□□□□□ -0.02
VARS2Q5ST30 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.96□□□□□ -0.02
VARS2Q5ST30 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
VARS2Q5ST30 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
VARS2Q5ST30 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
VARS2Q5ST30 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
VARS2Q5ST30 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
VARS2Q5ST30 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VARS2Q5ST30 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VARS2Q5ST30 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
VARS2Q5ST30 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.95□□□□□ -0.02
VARS2Q5ST30 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
VARS2Q5ST30 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VARS2Q5ST30 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
VARS2Q5ST30 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.95□□□□□ -0.02
VARS2Q5ST30 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
VARS2Q5ST30 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC14.95□□□□□ -0.02
VARS2Q5ST30 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VARS2Q5ST30 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VARS2Q5ST30 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC14.95□□□□□ -0.02
VARS2Q5ST30 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
VARS2Q5ST30 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC14.95□□□□□ -0.02
VARS2Q5ST30 SETP8-201ENST00000435341 628 ntBASIC14.95□□□□□ -0.02
VARS2Q5ST30 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC14.95□□□□□ -0.02
VARS2Q5ST30 RPL35P9-201ENST00000446059 350 ntBASIC14.95□□□□□ -0.02
VARS2Q5ST30 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC14.95□□□□□ -0.02
VARS2Q5ST30 RN7SL375P-201ENST00000492442 298 ntBASIC14.95□□□□□ -0.02
VARS2Q5ST30 REEP5-205ENST00000504247 480 ntTSL 5 BASIC14.95□□□□□ -0.02
VARS2Q5ST30 LINC00634-202ENST00000505157 222 ntBASIC14.95□□□□□ -0.02
VARS2Q5ST30 IGHV1-12-201ENST00000518307 205 ntBASIC14.95□□□□□ -0.02
VARS2Q5ST30 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VARS2Q5ST30 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC14.95□□□□□ -0.02
VARS2Q5ST30 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC14.95□□□□□ -0.02
VARS2Q5ST30 AC132825.4-202ENST00000578792 434 ntBASIC14.95□□□□□ -0.02
VARS2Q5ST30 AP001793.2-201ENST00000580267 780 ntTSL 2 BASIC14.95□□□□□ -0.02
VARS2Q5ST30 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC14.95□□□□□ -0.02
VARS2Q5ST30 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC14.95□□□□□ -0.02
VARS2Q5ST30 ZNF30-AS1-201ENST00000604333 625 ntTSL 3 BASIC14.95□□□□□ -0.02
VARS2Q5ST30 AC018754.1-201ENST00000607486 925 ntBASIC14.95□□□□□ -0.02
VARS2Q5ST30 AC108673.3-201ENST00000609183 335 ntBASIC14.95□□□□□ -0.02
VARS2Q5ST30 FO393412.1-201ENST00000619841 382 ntBASIC14.95□□□□□ -0.02
VARS2Q5ST30 AC138466.5-201ENST00000624002 808 ntBASIC14.95□□□□□ -0.02
VARS2Q5ST30 ST5-261ENST00000626808 1071 ntTSL 5 BASIC14.95□□□□□ -0.02
VARS2Q5ST30 LINC00976-203ENST00000630386 866 ntTSL 5 BASIC14.95□□□□□ -0.02
VARS2Q5ST30 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC14.95□□□□□ -0.02
VARS2Q5ST30 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.95□□□□□ -0.02
VARS2Q5ST30 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.95□□□□□ -0.02
VARS2Q5ST30 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VARS2Q5ST30 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VARS2Q5ST30 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VARS2Q5ST30 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.95□□□□□ -0.02
VARS2Q5ST30 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VARS2Q5ST30 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.95□□□□□ -0.02
VARS2Q5ST30 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC14.95□□□□□ -0.02
VARS2Q5ST30 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VARS2Q5ST30 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC14.95□□□□□ -0.02
VARS2Q5ST30 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
VARS2Q5ST30 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
VARS2Q5ST30 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
VARS2Q5ST30 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
VARS2Q5ST30 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
VARS2Q5ST30 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VARS2Q5ST30 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
VARS2Q5ST30 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.95□□□□□ -0.02
VARS2Q5ST30 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.94□□□□□ -0.02
VARS2Q5ST30 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VARS2Q5ST30 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.94□□□□□ -0.02
VARS2Q5ST30 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VARS2Q5ST30 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
VARS2Q5ST30 MIR600HG-201ENST00000449175 5984 ntBASIC14.94□□□□□ -0.02
VARS2Q5ST30 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
VARS2Q5ST30 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
VARS2Q5ST30 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VARS2Q5ST30 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
VARS2Q5ST30 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.94□□□□□ -0.02
VARS2Q5ST30 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms