Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 MIR4783-201ENST00000580343 82 ntBASIC9.37□□□□□ -0.91
SYCNQ0VAF6 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 TECR-220ENST00000600083 1204 ntTSL 2 BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 AC009542.2-202ENST00000619004 1067 ntBASIC9.37□□□□□ -0.91
SYCNQ0VAF6 CR392039.2-201ENST00000623182 509 ntBASIC9.37□□□□□ -0.91
SYCNQ0VAF6 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 ROBO2-209ENST00000487694 5919 ntTSL 5 BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 AC072061.1-201ENST00000569710 2234 ntBASIC9.37□□□□□ -0.91
SYCNQ0VAF6 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 COL6A4P2-202ENST00000504443 2753 ntBASIC9.37□□□□□ -0.91
SYCNQ0VAF6 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 MAML3-203ENST00000509479 6844 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 CYP4F23P-201ENST00000593402 1579 ntBASIC9.37□□□□□ -0.91
SYCNQ0VAF6 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 AC018629.1-201ENST00000623381 1736 ntBASIC9.36□□□□□ -0.91
SYCNQ0VAF6 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 LSS-211ENST00000522411 2523 ntTSL 2 BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 AL928654.5-201ENST00000624831 2501 ntBASIC9.36□□□□□ -0.91
SYCNQ0VAF6 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 ERCC6L2-201ENST00000288985 4564 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 HNRNPA1P63-201ENST00000427917 963 ntBASIC9.36□□□□□ -0.91
SYCNQ0VAF6 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 RNMTL1P1-201ENST00000454103 560 ntBASIC9.36□□□□□ -0.91
SYCNQ0VAF6 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 RPL18P13-201ENST00000478088 569 ntBASIC9.36□□□□□ -0.91
SYCNQ0VAF6 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 AC106794.1-201ENST00000506935 792 ntBASIC9.36□□□□□ -0.91
SYCNQ0VAF6 SCARNA21-201ENST00000517026 139 ntBASIC9.36□□□□□ -0.91
SYCNQ0VAF6 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 AP000346.4-201ENST00000614827 381 ntBASIC9.36□□□□□ -0.91
SYCNQ0VAF6 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SYCNQ0VAF6 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms