Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
AP3S2P59780 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
AP3S2P59780 C1QBPP1-201ENST00000400117 770 ntBASIC12.11□□□□□ -0.47
AP3S2P59780 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.11□□□□□ -0.47
AP3S2P59780 AL590627.1-203ENST00000421194 1026 ntBASIC12.11□□□□□ -0.47
AP3S2P59780 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC12.11□□□□□ -0.47
AP3S2P59780 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC12.11□□□□□ -0.47
AP3S2P59780 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC12.11□□□□□ -0.47
AP3S2P59780 LINC01428-201ENST00000449581 874 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
AP3S2P59780 NMU-202ENST00000505262 693 ntTSL 3 BASIC12.11□□□□□ -0.47
AP3S2P59780 KRT18P25-201ENST00000508931 1278 ntBASIC12.11□□□□□ -0.47
AP3S2P59780 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC12.11□□□□□ -0.47
AP3S2P59780 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC12.11□□□□□ -0.47
AP3S2P59780 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC12.11□□□□□ -0.47
AP3S2P59780 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
AP3S2P59780 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
AP3S2P59780 AL512310.5-201ENST00000551999 515 ntBASIC12.11□□□□□ -0.47
AP3S2P59780 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC12.11□□□□□ -0.47
AP3S2P59780 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC12.11□□□□□ -0.47
AP3S2P59780 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC12.11□□□□□ -0.47
AP3S2P59780 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC12.11□□□□□ -0.47
AP3S2P59780 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC12.11□□□□□ -0.47
AP3S2P59780 AC092028.1-202ENST00000641483 3547 ntBASIC12.11□□□□□ -0.47
AP3S2P59780 AC092028.1-201ENST00000641781 3540 ntBASIC12.11□□□□□ -0.47
AP3S2P59780 TMEM164-204ENST00000372073 5567 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
AP3S2P59780 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
AP3S2P59780 GNG4-204ENST00000450593 4978 ntAPPRIS P1 TSL 4 BASIC12.11□□□□□ -0.47
AP3S2P59780 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
AP3S2P59780 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
AP3S2P59780 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
AP3S2P59780 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
AP3S2P59780 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
AP3S2P59780 SLC6A1-201ENST00000287766 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
AP3S2P59780 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
AP3S2P59780 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC12.11□□□□□ -0.47
AP3S2P59780 KDM2A-210ENST00000529006 6967 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
AP3S2P59780 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
AP3S2P59780 DNMT3A-202ENST00000321117 4279 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
AP3S2P59780 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
AP3S2P59780 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
AP3S2P59780 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
AP3S2P59780 GEMIN5-201ENST00000285873 5397 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
AP3S2P59780 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
AP3S2P59780 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
AP3S2P59780 SHPRH-202ENST00000367503 5237 ntTSL 5 BASIC12.1□□□□□ -0.47
AP3S2P59780 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
AP3S2P59780 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC12.1□□□□□ -0.47
AP3S2P59780 AL845472.1-202ENST00000624675 4080 ntBASIC12.1□□□□□ -0.47
AP3S2P59780 RBM8A-204ENST00000583313 4961 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
AP3S2P59780 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC12.1□□□□□ -0.47
AP3S2P59780 SGSM1-201ENST00000400358 6643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
AP3S2P59780 PRKAB2-201ENST00000254101 5417 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
AP3S2P59780 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC12.1□□□□□ -0.47
AP3S2P59780 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
AP3S2P59780 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC12.1□□□□□ -0.47
AP3S2P59780 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
AP3S2P59780 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
AP3S2P59780 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
AP3S2P59780 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
AP3S2P59780 PMP22-202ENST00000395936 816 ntTSL 3 BASIC12.1□□□□□ -0.47
AP3S2P59780 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC12.1□□□□□ -0.47
AP3S2P59780 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
AP3S2P59780 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC12.1□□□□□ -0.47
AP3S2P59780 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
AP3S2P59780 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
AP3S2P59780 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC12.1□□□□□ -0.47
AP3S2P59780 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC12.1□□□□□ -0.47
AP3S2P59780 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC12.1□□□□□ -0.47
AP3S2P59780 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC12.1□□□□□ -0.47
AP3S2P59780 AC005829.1-201ENST00000570002 483 ntBASIC12.1□□□□□ -0.47
AP3S2P59780 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC12.1□□□□□ -0.47
AP3S2P59780 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC12.1□□□□□ -0.47
AP3S2P59780 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC12.1□□□□□ -0.47
AP3S2P59780 ZNF473-205ENST00000595661 4828 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
AP3S2P59780 SIGLEC1-201ENST00000344754 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
AP3S2P59780 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC12.1□□□□□ -0.47
AP3S2P59780 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
AP3S2P59780 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC12.1□□□□□ -0.47
AP3S2P59780 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
AP3S2P59780 ATXN2L-201ENST00000325215 3788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
AP3S2P59780 FLJ30679-201ENST00000624773 1980 ntBASIC12.1□□□□□ -0.47
AP3S2P59780 LINC00563-201ENST00000566370 1400 ntBASIC12.1□□□□□ -0.47
AP3S2P59780 USP2-AS1-202ENST00000500970 1784 ntTSL 2 BASIC12.1□□□□□ -0.47
AP3S2P59780 KLHL24-211ENST00000476808 2126 ntTSL 2 BASIC12.1□□□□□ -0.47
AP3S2P59780 FKBP4P6-201ENST00000457486 1332 ntBASIC12.1□□□□□ -0.47
AP3S2P59780 PPP1R11-204ENST00000376769 1689 ntTSL 2 BASIC12.1□□□□□ -0.47
AP3S2P59780 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
AP3S2P59780 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC12.09□□□□□ -0.47
AP3S2P59780 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC12.09□□□□□ -0.47
AP3S2P59780 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
AP3S2P59780 ROBO2-209ENST00000487694 5919 ntTSL 5 BASIC12.09□□□□□ -0.47
AP3S2P59780 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
AP3S2P59780 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AP3S2P59780 AXIN2-209ENST00000618960 4060 ntTSL 5 BASIC12.09□□□□□ -0.47
AP3S2P59780 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC12.09□□□□□ -0.47
AP3S2P59780 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC12.09□□□□□ -0.47
AP3S2P59780 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AP3S2P59780 PRICKLE1-216ENST00000640132 4278 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
AP3S2P59780 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
AP3S2P59780 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms