Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HTR3AP46098 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HTR3AP46098 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HTR3AP46098 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HTR3AP46098 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
HTR3AP46098 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HTR3AP46098 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC13.07□□□□□ -0.32
HTR3AP46098 KRT18P36-201ENST00000411618 1276 ntBASIC13.07□□□□□ -0.32
HTR3AP46098 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
HTR3AP46098 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC13.07□□□□□ -0.32
HTR3AP46098 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HTR3AP46098 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC13.07□□□□□ -0.32
HTR3AP46098 HLA-J-204ENST00000495278 958 ntBASIC13.07□□□□□ -0.32
HTR3AP46098 SCARNA21-201ENST00000517026 139 ntBASIC13.07□□□□□ -0.32
HTR3AP46098 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC13.07□□□□□ -0.32
HTR3AP46098 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC13.07□□□□□ -0.32
HTR3AP46098 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HTR3AP46098 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HTR3AP46098 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC13.07□□□□□ -0.32
HTR3AP46098 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
HTR3AP46098 AL512310.5-201ENST00000551999 515 ntBASIC13.07□□□□□ -0.32
HTR3AP46098 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC13.07□□□□□ -0.32
HTR3AP46098 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC13.07□□□□□ -0.32
HTR3AP46098 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC13.07□□□□□ -0.32
HTR3AP46098 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC13.07□□□□□ -0.32
HTR3AP46098 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.07□□□□□ -0.32
HTR3AP46098 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC13.07□□□□□ -0.32
HTR3AP46098 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HTR3AP46098 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
HTR3AP46098 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HTR3AP46098 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
HTR3AP46098 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HTR3AP46098 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HTR3AP46098 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
HTR3AP46098 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC13.07□□□□□ -0.32
HTR3AP46098 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HTR3AP46098 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC13.07□□□□□ -0.32
HTR3AP46098 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
HTR3AP46098 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
HTR3AP46098 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.07□□□□□ -0.32
HTR3AP46098 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
HTR3AP46098 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HTR3AP46098 FAM90A7P-201ENST00000382628 1395 ntBASIC13.07□□□□□ -0.32
HTR3AP46098 FAM90A23P-201ENST00000400136 1395 ntBASIC13.07□□□□□ -0.32
HTR3AP46098 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC13.07□□□□□ -0.32
HTR3AP46098 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC13.07□□□□□ -0.32
HTR3AP46098 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HTR3AP46098 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HTR3AP46098 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC13.06□□□□□ -0.32
HTR3AP46098 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HTR3AP46098 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC13.06□□□□□ -0.32
HTR3AP46098 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC13.06□□□□□ -0.32
HTR3AP46098 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC13.06□□□□□ -0.32
HTR3AP46098 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HTR3AP46098 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HTR3AP46098 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
HTR3AP46098 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
HTR3AP46098 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HTR3AP46098 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC13.06□□□□□ -0.32
HTR3AP46098 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HTR3AP46098 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HTR3AP46098 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.06□□□□□ -0.32
HTR3AP46098 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
HTR3AP46098 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
HTR3AP46098 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.06□□□□□ -0.32
HTR3AP46098 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HTR3AP46098 CCT8L1P-201ENST00000465400 1674 ntBASIC13.06□□□□□ -0.32
HTR3AP46098 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
HTR3AP46098 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
HTR3AP46098 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
HTR3AP46098 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.06□□□□□ -0.32
HTR3AP46098 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HTR3AP46098 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HTR3AP46098 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
HTR3AP46098 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HTR3AP46098 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
HTR3AP46098 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC13.06□□□□□ -0.32
HTR3AP46098 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
HTR3AP46098 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
HTR3AP46098 KRTAP10-13P-201ENST00000412914 571 ntBASIC13.06□□□□□ -0.32
HTR3AP46098 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC13.06□□□□□ -0.32
HTR3AP46098 VDAC1P1-201ENST00000439229 848 ntBASIC13.06□□□□□ -0.32
HTR3AP46098 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HTR3AP46098 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HTR3AP46098 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HTR3AP46098 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC13.06□□□□□ -0.32
HTR3AP46098 AC126915.1-201ENST00000522847 1038 ntBASIC13.06□□□□□ -0.32
HTR3AP46098 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC13.06□□□□□ -0.32
HTR3AP46098 AC090164.2-201ENST00000611487 516 ntBASIC13.06□□□□□ -0.32
HTR3AP46098 AC005695.3-201ENST00000614522 232 ntBASIC13.06□□□□□ -0.32
HTR3AP46098 AC022748.3-201ENST00000621828 275 ntBASIC13.06□□□□□ -0.32
HTR3AP46098 PCBP2-OT1-201ENST00000634357 590 ntBASIC13.06□□□□□ -0.32
HTR3AP46098 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HTR3AP46098 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
HTR3AP46098 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC13.06□□□□□ -0.32
HTR3AP46098 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HTR3AP46098 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HTR3AP46098 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HTR3AP46098 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.06□□□□□ -0.32
HTR3AP46098 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms