Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
LTBRP36941 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LTBRP36941 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LTBRP36941 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LTBRP36941 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
LTBRP36941 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
LTBRP36941 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LTBRP36941 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.12□□□□□ -0.15
LTBRP36941 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LTBRP36941 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LTBRP36941 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LTBRP36941 AF013593.1-201ENST00000458074 1487 ntBASIC14.12□□□□□ -0.15
LTBRP36941 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
LTBRP36941 FMO6P-201ENST00000236166 1620 ntBASIC14.12□□□□□ -0.15
LTBRP36941 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LTBRP36941 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LTBRP36941 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LTBRP36941 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LTBRP36941 HSPA7-201ENST00000445535 1927 ntBASIC14.11□□□□□ -0.15
LTBRP36941 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LTBRP36941 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LTBRP36941 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LTBRP36941 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LTBRP36941 SLC25A3-202ENST00000228318 1678 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
LTBRP36941 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LTBRP36941 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.11□□□□□ -0.15
LTBRP36941 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.11□□□□□ -0.15
LTBRP36941 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
LTBRP36941 IQCF1-201ENST00000310914 695 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LTBRP36941 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LTBRP36941 TRMT11-202ENST00000368332 1889 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
LTBRP36941 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LTBRP36941 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LTBRP36941 HYKK-201ENST00000388988 1235 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
LTBRP36941 AL356653.1-201ENST00000402743 360 ntBASIC14.11□□□□□ -0.15
LTBRP36941 SERF2-205ENST00000403425 690 ntTSL 2 BASIC14.11□□□□□ -0.15
LTBRP36941 KDM5C-IT1-201ENST00000412242 755 ntTSL 5 BASIC14.11□□□□□ -0.15
LTBRP36941 TUBB8P9-201ENST00000422534 1276 ntBASIC14.11□□□□□ -0.15
LTBRP36941 TUBB8P10-201ENST00000430210 1279 ntBASIC14.11□□□□□ -0.15
LTBRP36941 AC069421.1-201ENST00000447462 323 ntBASIC14.11□□□□□ -0.15
LTBRP36941 AC010997.1-201ENST00000447646 350 ntBASIC14.11□□□□□ -0.15
LTBRP36941 TULP3P1-202ENST00000453253 1291 ntBASIC14.11□□□□□ -0.15
LTBRP36941 RN7SL638P-201ENST00000494527 290 ntBASIC14.11□□□□□ -0.15
LTBRP36941 PDPN-208ENST00000509009 571 ntTSL 4 BASIC14.11□□□□□ -0.15
LTBRP36941 SAA2-206ENST00000530400 323 ntTSL 3 BASIC14.11□□□□□ -0.15
LTBRP36941 AC100858.2-201ENST00000531948 487 ntTSL 3 BASIC14.11□□□□□ -0.15
LTBRP36941 SCGB1A1-202ENST00000534397 466 ntTSL 3 BASIC14.11□□□□□ -0.15
LTBRP36941 AC025576.1-201ENST00000536455 462 ntTSL 5 BASIC14.11□□□□□ -0.15
LTBRP36941 PAX8-AS1-219ENST00000623306 840 ntTSL 5 BASIC14.11□□□□□ -0.15
LTBRP36941 AC245427.1-201ENST00000633705 760 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
LTBRP36941 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC14.11□□□□□ -0.15
LTBRP36941 GTF3A-209ENST00000640289 1098 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LTBRP36941 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LTBRP36941 SEPT10-208ENST00000437928 1782 ntTSL 5 BASIC14.11□□□□□ -0.15
LTBRP36941 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.11□□□□□ -0.15
LTBRP36941 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
LTBRP36941 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LTBRP36941 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
LTBRP36941 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
LTBRP36941 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LTBRP36941 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
LTBRP36941 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
LTBRP36941 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
LTBRP36941 MKRN7P-201ENST00000433469 1371 ntBASIC14.1□□□□□ -0.15
LTBRP36941 AC106872.9-201ENST00000512437 1393 ntBASIC14.1□□□□□ -0.15
LTBRP36941 AC034205.3-201ENST00000603595 1376 ntBASIC14.1□□□□□ -0.15
LTBRP36941 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
LTBRP36941 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LTBRP36941 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LTBRP36941 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
LTBRP36941 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LTBRP36941 BX640514.1-201ENST00000583223 1918 ntBASIC14.1□□□□□ -0.15
LTBRP36941 CCDC159-209ENST00000588790 1408 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
LTBRP36941 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LTBRP36941 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LTBRP36941 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LTBRP36941 KLK8-203ENST00000347619 555 ntTSL 2 BASIC14.1□□□□□ -0.15
LTBRP36941 FANK1-203ENST00000368693 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LTBRP36941 MIR766-201ENST00000390223 111 ntBASIC14.1□□□□□ -0.15
LTBRP36941 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
LTBRP36941 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LTBRP36941 AC245128.1-201ENST00000400864 1294 ntTSL 5 BASIC14.1□□□□□ -0.15
LTBRP36941 SNORD23-201ENST00000408876 110 ntBASIC14.1□□□□□ -0.15
LTBRP36941 AC074019.1-201ENST00000428788 1096 ntBASIC14.1□□□□□ -0.15
LTBRP36941 DHRSX-IT1-201ENST00000437244 651 ntTSL 5 BASIC14.1□□□□□ -0.15
LTBRP36941 SOX2-OT-203ENST00000466034 926 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LTBRP36941 RAB6B-205ENST00000486858 880 ntTSL 2 BASIC14.1□□□□□ -0.15
LTBRP36941 HNRNPA1P4-201ENST00000509706 756 ntBASIC14.1□□□□□ -0.15
LTBRP36941 AC010395.2-201ENST00000509899 904 ntBASIC14.1□□□□□ -0.15
LTBRP36941 AACSP1-202ENST00000521412 1095 ntBASIC14.1□□□□□ -0.15
LTBRP36941 PIGCP1-201ENST00000527583 895 ntBASIC14.1□□□□□ -0.15
LTBRP36941 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC14.1□□□□□ -0.15
LTBRP36941 AL157871.2-201ENST00000556212 552 ntTSL 3 BASIC14.1□□□□□ -0.15
LTBRP36941 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC14.1□□□□□ -0.15
LTBRP36941 PIGH-210ENST00000560722 903 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
LTBRP36941 Z92544.2-202ENST00000566927 407 ntTSL 3 BASIC14.1□□□□□ -0.15
LTBRP36941 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC14.1□□□□□ -0.15
LTBRP36941 PPY-202ENST00000587006 431 ntTSL 3 BASIC14.1□□□□□ -0.15
LTBRP36941 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC14.1□□□□□ -0.15
LTBRP36941 SOX2-OT-221ENST00000594942 675 ntTSL 5 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms