Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC23.59■■□□□ 1.37
TOP2AP11388 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
TOP2AP11388 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
TOP2AP11388 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TOP2AP11388 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
TOP2AP11388 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
TOP2AP11388 FANK1-203ENST00000368693 1294 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TOP2AP11388 CA5BP1-205ENST00000435806 1064 ntBASIC23.59■■□□□ 1.37
TOP2AP11388 TMCO1-203ENST00000464650 1100 ntTSL 2 BASIC23.59■■□□□ 1.37
TOP2AP11388 RAB6B-205ENST00000486858 880 ntTSL 2 BASIC23.59■■□□□ 1.37
TOP2AP11388 H1FOO-202ENST00000503977 881 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
TOP2AP11388 AL583722.3-201ENST00000553433 503 ntTSL 4 BASIC23.59■■□□□ 1.37
TOP2AP11388 AC010319.2-201ENST00000594663 892 ntAPPRIS P1 TSL 3 BASIC23.59■■□□□ 1.37
TOP2AP11388 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC23.59■■□□□ 1.37
TOP2AP11388 BEND3P1-201ENST00000421591 1944 ntBASIC23.58■■□□□ 1.37
TOP2AP11388 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
TOP2AP11388 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
TOP2AP11388 AC007336.3-201ENST00000623886 2160 ntBASIC23.58■■□□□ 1.37
TOP2AP11388 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
TOP2AP11388 FAM238C-202ENST00000639963 1787 ntTSL 2 BASIC23.58■■□□□ 1.37
TOP2AP11388 CLP1-202ENST00000525602 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
TOP2AP11388 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
TOP2AP11388 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC23.58■■□□□ 1.37
TOP2AP11388 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC23.58■■□□□ 1.37
TOP2AP11388 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
TOP2AP11388 SERPING1-202ENST00000340687 1719 ntTSL 5 BASIC23.58■■□□□ 1.37
TOP2AP11388 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC23.58■■□□□ 1.37
TOP2AP11388 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
TOP2AP11388 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC23.58■■□□□ 1.37
TOP2AP11388 TCP1-215ENST00000544255 1403 ntTSL 5 BASIC23.58■■□□□ 1.37
TOP2AP11388 Z97653.2-201ENST00000623057 1418 ntBASIC23.58■■□□□ 1.37
TOP2AP11388 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
TOP2AP11388 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
TOP2AP11388 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
TOP2AP11388 TIMP1-201ENST00000218388 892 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
TOP2AP11388 TIMP1-202ENST00000377017 626 ntTSL 2 BASIC23.58■■□□□ 1.36
TOP2AP11388 IGSF23-201ENST00000402988 989 ntAPPRIS P2 TSL 3 BASIC23.58■■□□□ 1.36
TOP2AP11388 PRSS45-201ENST00000442359 687 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
TOP2AP11388 HTATIP2-203ENST00000443524 967 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.36
TOP2AP11388 COL18A1-AS2-201ENST00000446475 552 ntTSL 4 BASIC23.58■■□□□ 1.36
TOP2AP11388 RN7SL479P-201ENST00000472003 300 ntBASIC23.58■■□□□ 1.36
TOP2AP11388 SPG20-AS1-203ENST00000493739 566 ntTSL 3 BASIC23.58■■□□□ 1.36
TOP2AP11388 WASIR2-201ENST00000527434 1054 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
TOP2AP11388 AC100858.2-201ENST00000531948 487 ntTSL 3 BASIC23.58■■□□□ 1.36
TOP2AP11388 BOLA3P2-201ENST00000586496 323 ntBASIC23.58■■□□□ 1.36
TOP2AP11388 AC073254.1-209ENST00000604677 631 ntTSL 5 BASIC23.58■■□□□ 1.36
TOP2AP11388 ZNF674-AS1-202ENST00000609887 672 ntTSL 5 BASIC23.58■■□□□ 1.36
TOP2AP11388 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
TOP2AP11388 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
TOP2AP11388 TUBB8P5-201ENST00000445286 1351 ntBASIC23.58■■□□□ 1.36
TOP2AP11388 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC23.58■■□□□ 1.36
TOP2AP11388 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
TOP2AP11388 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC23.57■■□□□ 1.36
TOP2AP11388 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC23.57■■□□□ 1.36
TOP2AP11388 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TOP2AP11388 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
TOP2AP11388 RHPN1-AS1-201ENST00000518049 1918 ntBASIC23.57■■□□□ 1.36
TOP2AP11388 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TOP2AP11388 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
TOP2AP11388 ZNF493-208ENST00000599461 1769 ntBASIC23.57■■□□□ 1.36
TOP2AP11388 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TOP2AP11388 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
TOP2AP11388 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TOP2AP11388 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
TOP2AP11388 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
TOP2AP11388 TPM3-204ENST00000323144 1088 ntTSL 2 BASIC23.57■■□□□ 1.36
TOP2AP11388 AC091729.3-203ENST00000413706 674 ntTSL 5 BASIC23.57■■□□□ 1.36
TOP2AP11388 TEDDM2P-201ENST00000414169 786 ntBASIC23.57■■□□□ 1.36
TOP2AP11388 SAP18P2-201ENST00000434334 459 ntBASIC23.57■■□□□ 1.36
TOP2AP11388 PRDX2P3-201ENST00000515779 586 ntBASIC23.57■■□□□ 1.36
TOP2AP11388 AC090820.1-201ENST00000519722 591 ntBASIC23.57■■□□□ 1.36
TOP2AP11388 GOLGA2P10-201ENST00000550961 817 ntBASIC23.57■■□□□ 1.36
TOP2AP11388 CSH2-207ENST00000613718 666 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
TOP2AP11388 AC117500.5-201ENST00000623233 527 ntBASIC23.57■■□□□ 1.36
TOP2AP11388 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TOP2AP11388 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
TOP2AP11388 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
TOP2AP11388 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
TOP2AP11388 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TOP2AP11388 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TOP2AP11388 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
TOP2AP11388 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC23.57■■□□□ 1.36
TOP2AP11388 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC23.57■■□□□ 1.36
TOP2AP11388 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC23.57■■□□□ 1.36
TOP2AP11388 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC23.57■■□□□ 1.36
TOP2AP11388 ZFAND1-201ENST00000220669 1798 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
TOP2AP11388 ZFAND1-221ENST00000523096 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TOP2AP11388 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC23.56■■□□□ 1.36
TOP2AP11388 AC124319.4-201ENST00000622931 2161 ntBASIC23.56■■□□□ 1.36
TOP2AP11388 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TOP2AP11388 TRIP12-205ENST00000409677 1507 ntTSL 2 BASIC23.56■■□□□ 1.36
TOP2AP11388 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TOP2AP11388 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC23.56■■□□□ 1.36
TOP2AP11388 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
TOP2AP11388 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
TOP2AP11388 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TOP2AP11388 EDF1-201ENST00000224073 640 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TOP2AP11388 AL022725.1-201ENST00000436283 369 ntTSL 2 BASIC23.56■■□□□ 1.36
TOP2AP11388 AC093106.1-201ENST00000437271 352 ntBASIC23.56■■□□□ 1.36
TOP2AP11388 TCEA3-204ENST00000461794 713 ntTSL 3 BASIC23.56■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms