Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC14.15□□□□□ -0.14
APOA4P06727 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOA4P06727 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
APOA4P06727 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOA4P06727 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
APOA4P06727 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOA4P06727 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC14.15□□□□□ -0.14
APOA4P06727 AC007952.5-201ENST00000572818 1486 ntBASIC14.15□□□□□ -0.14
APOA4P06727 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
APOA4P06727 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
APOA4P06727 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
APOA4P06727 NPPA-201ENST00000376476 728 ntTSL 3 BASIC14.15□□□□□ -0.14
APOA4P06727 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC14.15□□□□□ -0.14
APOA4P06727 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
APOA4P06727 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14.15□□□□□ -0.14
APOA4P06727 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
APOA4P06727 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC14.15□□□□□ -0.14
APOA4P06727 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
APOA4P06727 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
APOA4P06727 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
APOA4P06727 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.15□□□□□ -0.14
APOA4P06727 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOA4P06727 SYT17-208ENST00000568433 812 ntTSL 3 BASIC14.15□□□□□ -0.14
APOA4P06727 SNORD3B-2-202ENST00000571722 791 ntBASIC14.15□□□□□ -0.14
APOA4P06727 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.15□□□□□ -0.14
APOA4P06727 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
APOA4P06727 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOA4P06727 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOA4P06727 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
APOA4P06727 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
APOA4P06727 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOA4P06727 OS9-218ENST00000551035 2246 ntTSL 2 BASIC14.15□□□□□ -0.14
APOA4P06727 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOA4P06727 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOA4P06727 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
APOA4P06727 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC14.15□□□□□ -0.14
APOA4P06727 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
APOA4P06727 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOA4P06727 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOA4P06727 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOA4P06727 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
APOA4P06727 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC14.15□□□□□ -0.14
APOA4P06727 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
APOA4P06727 AGAP12P-201ENST00000585227 2359 ntBASIC14.15□□□□□ -0.14
APOA4P06727 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOA4P06727 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
APOA4P06727 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOA4P06727 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOA4P06727 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOA4P06727 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC14.14□□□□□ -0.15
APOA4P06727 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
APOA4P06727 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOA4P06727 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOA4P06727 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
APOA4P06727 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.14□□□□□ -0.15
APOA4P06727 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOA4P06727 STRCP1-201ENST00000509801 5328 ntBASIC14.14□□□□□ -0.15
APOA4P06727 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
APOA4P06727 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
APOA4P06727 CCT8L1P-201ENST00000465400 1674 ntBASIC14.14□□□□□ -0.15
APOA4P06727 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOA4P06727 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC14.14□□□□□ -0.15
APOA4P06727 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
APOA4P06727 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
APOA4P06727 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC14.14□□□□□ -0.15
APOA4P06727 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
APOA4P06727 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC14.14□□□□□ -0.15
APOA4P06727 RCC2P1-201ENST00000452257 1476 ntBASIC14.14□□□□□ -0.15
APOA4P06727 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.14□□□□□ -0.15
APOA4P06727 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOA4P06727 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
APOA4P06727 AL356585.2-201ENST00000625078 2396 ntBASIC14.14□□□□□ -0.15
APOA4P06727 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOA4P06727 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOA4P06727 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOA4P06727 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.14□□□□□ -0.15
APOA4P06727 FAM86MP-201ENST00000340703 885 ntBASIC14.14□□□□□ -0.15
APOA4P06727 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.14□□□□□ -0.15
APOA4P06727 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOA4P06727 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC14.14□□□□□ -0.15
APOA4P06727 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOA4P06727 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC14.14□□□□□ -0.15
APOA4P06727 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
APOA4P06727 AC006033.1-201ENST00000440505 426 ntBASIC14.14□□□□□ -0.15
APOA4P06727 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.14□□□□□ -0.15
APOA4P06727 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.14□□□□□ -0.15
APOA4P06727 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.14□□□□□ -0.15
APOA4P06727 AC092658.1-201ENST00000505836 891 ntBASIC14.14□□□□□ -0.15
APOA4P06727 AC044849.1-201ENST00000519737 1188 ntBASIC14.14□□□□□ -0.15
APOA4P06727 AC009779.1-201ENST00000551138 283 ntBASIC14.14□□□□□ -0.15
APOA4P06727 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14.14□□□□□ -0.15
APOA4P06727 JPT2-214ENST00000569765 782 ntTSL 2 BASIC14.14□□□□□ -0.15
APOA4P06727 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.14□□□□□ -0.15
APOA4P06727 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
APOA4P06727 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
APOA4P06727 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC14.14□□□□□ -0.15
APOA4P06727 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
APOA4P06727 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.14□□□□□ -0.15
APOA4P06727 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.14□□□□□ -0.15
APOA4P06727 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms