Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV3P03979 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
TRGV3P03979 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
TRGV3P03979 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC11.13□□□□□ -0.63
TRGV3P03979 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV3P03979 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV3P03979 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV3P03979 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV3P03979 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC11.13□□□□□ -0.63
TRGV3P03979 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV3P03979 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV3P03979 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV3P03979 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC11.13□□□□□ -0.63
TRGV3P03979 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV3P03979 AL359881.3-201ENST00000602640 1721 ntBASIC11.13□□□□□ -0.63
TRGV3P03979 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV3P03979 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV3P03979 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV3P03979 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV3P03979 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
TRGV3P03979 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC11.13□□□□□ -0.63
TRGV3P03979 AC103592.1-201ENST00000394513 664 ntBASIC11.13□□□□□ -0.63
TRGV3P03979 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
TRGV3P03979 ACTG1P2-201ENST00000415776 1125 ntBASIC11.13□□□□□ -0.63
TRGV3P03979 ACTG1P11-201ENST00000425411 1125 ntBASIC11.13□□□□□ -0.63
TRGV3P03979 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC11.13□□□□□ -0.63
TRGV3P03979 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC11.13□□□□□ -0.63
TRGV3P03979 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC11.13□□□□□ -0.63
TRGV3P03979 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC11.13□□□□□ -0.63
TRGV3P03979 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC11.13□□□□□ -0.63
TRGV3P03979 KRT18P15-201ENST00000458108 1291 ntBASIC11.13□□□□□ -0.63
TRGV3P03979 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC11.13□□□□□ -0.63
TRGV3P03979 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
TRGV3P03979 ACTG1P17-201ENST00000558391 1119 ntBASIC11.13□□□□□ -0.63
TRGV3P03979 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC11.13□□□□□ -0.63
TRGV3P03979 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC11.13□□□□□ -0.63
TRGV3P03979 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV3P03979 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV3P03979 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC11.13□□□□□ -0.63
TRGV3P03979 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC11.13□□□□□ -0.63
TRGV3P03979 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC11.13□□□□□ -0.63
TRGV3P03979 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV3P03979 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC11.13□□□□□ -0.63
TRGV3P03979 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV3P03979 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC11.13□□□□□ -0.63
TRGV3P03979 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
TRGV3P03979 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC11.13□□□□□ -0.63
TRGV3P03979 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV3P03979 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV3P03979 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
TRGV3P03979 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC11.13□□□□□ -0.63
TRGV3P03979 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV3P03979 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV3P03979 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV3P03979 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV3P03979 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
TRGV3P03979 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV3P03979 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC11.12□□□□□ -0.63
TRGV3P03979 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRGV3P03979 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRGV3P03979 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRGV3P03979 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRGV3P03979 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRGV3P03979 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRGV3P03979 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
TRGV3P03979 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRGV3P03979 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRGV3P03979 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRGV3P03979 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRGV3P03979 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC11.12□□□□□ -0.63
TRGV3P03979 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
TRGV3P03979 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRGV3P03979 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC11.12□□□□□ -0.63
TRGV3P03979 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC11.12□□□□□ -0.63
TRGV3P03979 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRGV3P03979 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC11.12□□□□□ -0.63
TRGV3P03979 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRGV3P03979 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
TRGV3P03979 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC11.12□□□□□ -0.63
TRGV3P03979 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
TRGV3P03979 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRGV3P03979 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRGV3P03979 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
TRGV3P03979 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRGV3P03979 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
TRGV3P03979 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRGV3P03979 MBP-201ENST00000354542 575 ntTSL 2 BASIC11.12□□□□□ -0.63
TRGV3P03979 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
TRGV3P03979 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
TRGV3P03979 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC11.12□□□□□ -0.63
TRGV3P03979 RPS9P1-201ENST00000419943 583 ntBASIC11.12□□□□□ -0.63
TRGV3P03979 KRTAP19-9P-201ENST00000421795 191 ntBASIC11.12□□□□□ -0.63
TRGV3P03979 ISCA2P1-201ENST00000425548 448 ntBASIC11.12□□□□□ -0.63
TRGV3P03979 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC11.12□□□□□ -0.63
TRGV3P03979 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC11.12□□□□□ -0.63
TRGV3P03979 REEP1-202ENST00000453231 940 ntTSL 2 BASIC11.12□□□□□ -0.63
TRGV3P03979 ADM-202ENST00000524948 584 ntTSL 2 BASIC11.12□□□□□ -0.63
TRGV3P03979 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC11.12□□□□□ -0.63
TRGV3P03979 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC11.12□□□□□ -0.63
TRGV3P03979 AC093752.3-201ENST00000567343 901 ntBASIC11.12□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms