Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOEP02649 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
APOEP02649 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOEP02649 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
APOEP02649 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOEP02649 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.78□□□□□ -0.04
APOEP02649 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOEP02649 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
APOEP02649 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
APOEP02649 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC14.78□□□□□ -0.04
APOEP02649 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
APOEP02649 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.78□□□□□ -0.04
APOEP02649 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOEP02649 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC14.78□□□□□ -0.04
APOEP02649 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.78□□□□□ -0.04
APOEP02649 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
APOEP02649 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
APOEP02649 TBC1D3J-201ENST00000620719 1426 ntBASIC14.78□□□□□ -0.04
APOEP02649 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC14.78□□□□□ -0.04
APOEP02649 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOEP02649 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOEP02649 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.78□□□□□ -0.04
APOEP02649 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOEP02649 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC14.78□□□□□ -0.04
APOEP02649 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
APOEP02649 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOEP02649 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOEP02649 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOEP02649 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC14.78□□□□□ -0.04
APOEP02649 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
APOEP02649 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
APOEP02649 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC14.78□□□□□ -0.04
APOEP02649 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC14.78□□□□□ -0.04
APOEP02649 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
APOEP02649 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC14.78□□□□□ -0.04
APOEP02649 CHMP4BP1-201ENST00000556017 588 ntBASIC14.78□□□□□ -0.04
APOEP02649 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
APOEP02649 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC14.78□□□□□ -0.04
APOEP02649 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
APOEP02649 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOEP02649 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.78□□□□□ -0.04
APOEP02649 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOEP02649 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOEP02649 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.78□□□□□ -0.04
APOEP02649 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
APOEP02649 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.78□□□□□ -0.04
APOEP02649 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.78□□□□□ -0.04
APOEP02649 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOEP02649 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
APOEP02649 CICP20-201ENST00000443330 2801 ntBASIC14.78□□□□□ -0.04
APOEP02649 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.78□□□□□ -0.04
APOEP02649 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOEP02649 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
APOEP02649 FAM90A12P-201ENST00000519497 2375 ntBASIC14.77□□□□□ -0.04
APOEP02649 FAM90A24P-201ENST00000520792 2369 ntBASIC14.77□□□□□ -0.04
APOEP02649 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
APOEP02649 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
APOEP02649 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.77□□□□□ -0.04
APOEP02649 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.77□□□□□ -0.04
APOEP02649 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
APOEP02649 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
APOEP02649 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
APOEP02649 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
APOEP02649 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
APOEP02649 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
APOEP02649 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
APOEP02649 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
APOEP02649 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
APOEP02649 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
APOEP02649 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
APOEP02649 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.77□□□□□ -0.04
APOEP02649 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
APOEP02649 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
APOEP02649 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
APOEP02649 OR8T1P-201ENST00000421347 918 ntBASIC14.77□□□□□ -0.05
APOEP02649 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC14.77□□□□□ -0.05
APOEP02649 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
APOEP02649 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC14.77□□□□□ -0.05
APOEP02649 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC14.77□□□□□ -0.05
APOEP02649 IMP3P2-201ENST00000489760 475 ntBASIC14.77□□□□□ -0.05
APOEP02649 ALG1L13P-202ENST00000519320 584 ntBASIC14.77□□□□□ -0.05
APOEP02649 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
APOEP02649 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
APOEP02649 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
APOEP02649 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC14.77□□□□□ -0.05
APOEP02649 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC14.77□□□□□ -0.05
APOEP02649 AC026803.1-201ENST00000569130 274 ntBASIC14.77□□□□□ -0.05
APOEP02649 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC14.77□□□□□ -0.05
APOEP02649 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC14.77□□□□□ -0.05
APOEP02649 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC14.77□□□□□ -0.05
APOEP02649 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC14.77□□□□□ -0.05
APOEP02649 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC14.77□□□□□ -0.05
APOEP02649 AF254983.2-201ENST00000612331 135 ntBASIC14.77□□□□□ -0.05
APOEP02649 SNX12-206ENST00000622259 661 ntTSL 5 BASIC14.77□□□□□ -0.05
APOEP02649 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC14.77□□□□□ -0.05
APOEP02649 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
APOEP02649 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.77□□□□□ -0.05
APOEP02649 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
APOEP02649 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
APOEP02649 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms