Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC15.21■□□□□ 0.03
EXTL3O43909 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
EXTL3O43909 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
EXTL3O43909 AL365181.3-201ENST00000605886 3222 ntBASIC15.21■□□□□ 0.03
EXTL3O43909 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
EXTL3O43909 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
EXTL3O43909 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
EXTL3O43909 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
EXTL3O43909 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC15.21■□□□□ 0.03
EXTL3O43909 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
EXTL3O43909 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
EXTL3O43909 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
EXTL3O43909 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
EXTL3O43909 SNORA50C-201ENST00000408535 133 ntBASIC15.21■□□□□ 0.03
EXTL3O43909 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC15.21■□□□□ 0.03
EXTL3O43909 SCARNA12-201ENST00000459155 270 ntBASIC15.21■□□□□ 0.03
EXTL3O43909 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
EXTL3O43909 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
EXTL3O43909 AC008267.1-201ENST00000474858 1069 ntBASIC15.21■□□□□ 0.03
EXTL3O43909 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
EXTL3O43909 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC15.21■□□□□ 0.03
EXTL3O43909 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
EXTL3O43909 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
EXTL3O43909 POLD4-208ENST00000532830 904 ntTSL 3 BASIC15.21■□□□□ 0.03
EXTL3O43909 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC15.21■□□□□ 0.03
EXTL3O43909 AC138701.2-201ENST00000553634 226 ntBASIC15.21■□□□□ 0.03
EXTL3O43909 TPM1-223ENST00000560445 485 ntTSL 3 BASIC15.21■□□□□ 0.03
EXTL3O43909 MIR3147-201ENST00000577811 66 ntBASIC15.21■□□□□ 0.03
EXTL3O43909 AC005632.3-201ENST00000605544 308 ntBASIC15.21■□□□□ 0.03
EXTL3O43909 HPX-213ENST00000615166 826 ntTSL 5 BASIC15.21■□□□□ 0.03
EXTL3O43909 AL161773.1-201ENST00000624845 863 ntBASIC15.21■□□□□ 0.03
EXTL3O43909 SNORA50.1-201ENST00000628590 135 ntBASIC15.21■□□□□ 0.03
EXTL3O43909 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC15.21■□□□□ 0.03
EXTL3O43909 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
EXTL3O43909 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
EXTL3O43909 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
EXTL3O43909 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC15.21■□□□□ 0.03
EXTL3O43909 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
EXTL3O43909 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
EXTL3O43909 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.02
EXTL3O43909 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
EXTL3O43909 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
EXTL3O43909 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
EXTL3O43909 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC15.21■□□□□ 0.02
EXTL3O43909 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
EXTL3O43909 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
EXTL3O43909 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
EXTL3O43909 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC15.2■□□□□ 0.02
EXTL3O43909 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC15.2■□□□□ 0.02
EXTL3O43909 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC15.2■□□□□ 0.02
EXTL3O43909 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
EXTL3O43909 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
EXTL3O43909 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
EXTL3O43909 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
EXTL3O43909 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
EXTL3O43909 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
EXTL3O43909 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
EXTL3O43909 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
EXTL3O43909 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
EXTL3O43909 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
EXTL3O43909 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC15.2■□□□□ 0.02
EXTL3O43909 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
EXTL3O43909 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
EXTL3O43909 NME4-203ENST00000397722 1232 ntTSL 2 BASIC15.2■□□□□ 0.02
EXTL3O43909 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC15.2■□□□□ 0.02
EXTL3O43909 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC15.2■□□□□ 0.02
EXTL3O43909 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC15.2■□□□□ 0.02
EXTL3O43909 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
EXTL3O43909 RN7SL81P-201ENST00000493781 261 ntBASIC15.2■□□□□ 0.02
EXTL3O43909 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC15.2■□□□□ 0.02
EXTL3O43909 COQ10BP2-201ENST00000513804 724 ntBASIC15.2■□□□□ 0.02
EXTL3O43909 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
EXTL3O43909 NEU3-205ENST00000531619 582 ntTSL 5 BASIC15.2■□□□□ 0.02
EXTL3O43909 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC15.2■□□□□ 0.02
EXTL3O43909 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC15.2■□□□□ 0.02
EXTL3O43909 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
EXTL3O43909 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
EXTL3O43909 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
EXTL3O43909 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
EXTL3O43909 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
EXTL3O43909 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
EXTL3O43909 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC15.2■□□□□ 0.02
EXTL3O43909 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
EXTL3O43909 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
EXTL3O43909 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
EXTL3O43909 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
EXTL3O43909 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
EXTL3O43909 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
EXTL3O43909 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC15.2■□□□□ 0.02
EXTL3O43909 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
EXTL3O43909 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
EXTL3O43909 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC15.2■□□□□ 0.02
EXTL3O43909 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
EXTL3O43909 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC15.2■□□□□ 0.02
EXTL3O43909 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
EXTL3O43909 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
EXTL3O43909 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
EXTL3O43909 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
EXTL3O43909 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
EXTL3O43909 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms