Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.3□□□□□ -0.12
HMGB1P1B2RPK0 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.3□□□□□ -0.12
HMGB1P1B2RPK0 AC092580.3-201ENST00000430932 139 ntBASIC14.3□□□□□ -0.12
HMGB1P1B2RPK0 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HMGB1P1B2RPK0 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.3□□□□□ -0.12
HMGB1P1B2RPK0 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.3□□□□□ -0.12
HMGB1P1B2RPK0 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.3□□□□□ -0.12
HMGB1P1B2RPK0 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGB1P1B2RPK0 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.3□□□□□ -0.12
HMGB1P1B2RPK0 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.3□□□□□ -0.12
HMGB1P1B2RPK0 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
HMGB1P1B2RPK0 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.3□□□□□ -0.12
HMGB1P1B2RPK0 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.3□□□□□ -0.12
HMGB1P1B2RPK0 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.3□□□□□ -0.12
HMGB1P1B2RPK0 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGB1P1B2RPK0 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
HMGB1P1B2RPK0 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
HMGB1P1B2RPK0 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGB1P1B2RPK0 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGB1P1B2RPK0 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGB1P1B2RPK0 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC14.3□□□□□ -0.12
HMGB1P1B2RPK0 TMEM25-208ENST00000524725 2630 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
HMGB1P1B2RPK0 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGB1P1B2RPK0 SH3KBP1-202ENST00000379698 2678 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HMGB1P1B2RPK0 A1CF-204ENST00000373997 2116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGB1P1B2RPK0 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.3□□□□□ -0.12
HMGB1P1B2RPK0 LINC00563-201ENST00000566370 1400 ntBASIC14.3□□□□□ -0.12
HMGB1P1B2RPK0 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC14.3□□□□□ -0.12
HMGB1P1B2RPK0 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGB1P1B2RPK0 PDE12-201ENST00000311180 8773 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGB1P1B2RPK0 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGB1P1B2RPK0 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
HMGB1P1B2RPK0 CTAGE10P-201ENST00000318353 2408 ntBASIC14.3□□□□□ -0.12
HMGB1P1B2RPK0 RGS16-201ENST00000367558 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGB1P1B2RPK0 CAST-223ENST00000508608 2425 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
HMGB1P1B2RPK0 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HMGB1P1B2RPK0 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC14.3□□□□□ -0.12
HMGB1P1B2RPK0 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGB1P1B2RPK0 CCT8L1P-201ENST00000465400 1674 ntBASIC14.3□□□□□ -0.12
HMGB1P1B2RPK0 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGB1P1B2RPK0 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 AC008040.5-201ENST00000599781 1781 ntBASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 DBF4B-202ENST00000393547 1810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 FLJ30679-201ENST00000624773 1980 ntBASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 AC000068.1-201ENST00000431090 2097 ntTSL 2 BASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 ENDOV-203ENST00000517795 2548 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 DNAJB3-201ENST00000446806 729 ntBASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 CICP12-201ENST00000455801 843 ntBASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 TPRX2P-201ENST00000535362 881 ntBASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 AC023310.3-201ENST00000557027 670 ntBASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 AC100756.1-201ENST00000562736 682 ntBASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 AC140878.1-201ENST00000565277 250 ntBASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 AC138749.3-201ENST00000567691 622 ntBASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 AC116165.1-201ENST00000611806 668 ntBASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 ENPP7P14-201ENST00000621765 1040 ntBASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 SHMT1P1-201ENST00000419974 1312 ntBASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 PDZRN3-205ENST00000466780 2737 ntTSL 2 BASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 AC008764.8-201ENST00000623966 2717 ntBASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 PLSCR4-203ENST00000433593 2839 ntTSL 2 BASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 MARCH10-201ENST00000311269 3090 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 PAX3-205ENST00000392069 3170 ntTSL 5 BASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 PPP1R12B-214ENST00000491336 2046 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 ORMDL2-201ENST00000243045 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGB1P1B2RPK0 DUSP11-202ENST00000443070 2175 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms